Factsheet for TraesCS6D01G211600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, plasma membrane, peroxisome

Predictor Summary:

mitochondrion 3
peroxisome 1
plasma membrane 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G223800.1	Wheat	endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane	99.06	99.06
TraesCS6B01G257500.1	Wheat	endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane	98.31	98.31
HORVU6Hr1G058690.1	Barley	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	95.87	95.87
Zm00001d019480_P001	Maize	endoplasmic reticulum, peroxisome, plasma membrane	82.36	81.75
EER98411	Sorghum	plasma membrane	80.49	79.3
TraesCS4D01G313700.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	60.6	62.0
TraesCS5D01G512900.1	Wheat	plasma membrane	62.29	61.94
TraesCS5D01G472000.1	Wheat	plasma membrane	62.48	61.78
TraesCS4D01G313800.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	60.79	61.71
TraesCS5D01G513000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	50.66	61.36
TraesCS4D01G329900.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	60.41	60.98
TraesCS4D01G313600.1	Wheat	plasma membrane	61.16	60.82
TraesCS2D01G045700.1	Wheat	mitochondrion, plasma membrane	50.09	51.25
TraesCS2D01G045600.1	Wheat	mitochondrion	48.97	49.34
TraesCS4D01G010900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	50.09	48.28
TraesCS7D01G064900.1	Wheat	mitochondrion	50.28	48.2
TraesCS7D01G064200.1	Wheat	mitochondrion	50.09	48.11
TraesCS7D01G227800.1	Wheat	plasma membrane	48.03	45.39

Protein Annotations

MapMan:24.2.2.6	MapMan:25.3.2.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005315	GO:GO:0005575
GO:GO:0006810	GO:GO:0006817	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083
ScanProsite:PS00216	PFscan:PS50850	PANTHER:PTHR24064	PANTHER:PTHR24064:SF336	InterPro:Phos_permease	SUPFAM:SSF103473
InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00887	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G211600	EnsemblPlants:TraesCS6D01G211600.1	TIGR:cd06174

Description

No Description!

Coordinates

chr6D:+:298924492..298926093

Molecular Weight (calculated)

58857.0 Da

IEP (calculated)

8.514

GRAVY (calculated)

0.355

Length

533 amino acids

Sequence
(BLAST)

001: MARQQLQVLH ALDVARTQRY HAWAVVIAGM GFFADAYDIF CITLVTKLLG RIYYQVPGQR EPGMLPRRIE AAINGVTFCG MIVGQLLFGW LGDKVGRKMF
101: YGKTIMLMIM GSFLSGLSFG NTADGVMATL CFFRFWLGVG IGGDYPLSAT IISEYSNKRT RGSLIAAVFA MEGFGILAGC IVTLVVSATF QARFNPPAYA
201: EDHMASVPPQ ADYVWRIILM VGAIPAVFTY RWRVMMPETA RYTALVARDA EKAARDMSKV LKVEFSGEQD KIEGFTKDRD YGVFSRRFAR RHGWHLVGAV
301: ASWFVLDIVF YSQIILQEEI FRDIKWIPEA NSMSALEEAY RVARAQAIIA LCGTLPGYWF TIAFVDVVGR KAIQFLGFTM MKGLMLVVAG FYHQLTQPGR
401: RIWLVVMYAF TFFFANFGPN SITFIIPAEI FPAHVRTTCH GISSAAGKVG AIVGTFGFLY ASQRADGSNE TETGYPSGIG VRASLFVLAA CNVLGIIFTC
501: LLPEPNGRSL EEVSGEPING EDADLGDSKV LPL

Best Arabidopsis Sequence Match ( AT2G38940.1 )
(BLAST)

001: MAREQLQVLN ALDVAKTQWY HFTAIIIAGM GFFTDAYDLF CISLVTKLLG RIYYHVEGAQ KPGTLPPNVA AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGMTLMVMVL CSIASGLSFG HEPKAVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFVSAVFA MQGFGIMAGG IFAIIISSAF EAKFPSPAYA
201: DDALGSTIPQ ADLVWRIILM AGAIPAAMTY YSRSKMPETA RYTALVAKDA KQAASDMSKV LQVEIEPEQQ KLEEISKEKS KAFGLFSKEF MSRHGLHLLG
301: TTSTWFLLDI AFYSQNLFQK DIFSAIGWIP PAQSMNAIQE VFKIARAQTL IALCSTVPGY WFTVAFIDVI GRFAIQMMGF FFMTVFMFAL AIPYNHWTHK
401: ENRIGFVIMY SLTFFFANFG PNATTFVVPA EIFPARFRST CHGISAASGK LGAMVGAFGF LYLAQNPDKD KTDAGYPPGI GVRNSLIVLG VVNFLGILFT
501: FLVPESKGKS LEEMSGENED NENSNNDSRT VPIV

Arabidopsis Description

PHT1-4PHT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRB1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.