CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 5
peroxisome 1
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025028_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	82.39	85.69
TraesCS4A01G418300.1	Wheat	plasma membrane	72.11	74.01
TraesCS7D01G064200.1	Wheat	mitochondrion	72.48	71.17
TraesCS7A01G070000.1	Wheat	mitochondrion	72.29	70.86
TraesCS4A01G418400.1	Wheat	mitochondrion	72.29	70.86
TraesCS7D01G064900.1	Wheat	mitochondrion	71.56	70.14
TraesCS4A01G418000.1	Wheat	mitochondrion	71.38	69.84
TraesCS4A01G417900.1	Wheat	mitochondrion	53.39	69.12
EES10479	Sorghum	mitochondrion, plasma membrane	55.05	58.82
EER94156	Sorghum	plasma membrane	55.41	57.85
EER92843	Sorghum	cytosol, golgi, plasma membrane	54.13	56.51
EER91556	Sorghum	plasma membrane	55.6	56.01
OQU80695	Sorghum	cytosol, plasma membrane, vacuole	55.23	55.64
EER95493	Sorghum	plasma membrane	54.31	55.33
OQU81206	Sorghum	plasma membrane	53.39	54.29
KXG40235	Sorghum	plasma membrane	53.39	53.79
EER98411	Sorghum	plasma membrane	49.17	49.54
EES03373	Sorghum	plasma membrane	48.62	47.83
EER88333	Sorghum	cytosol, mitochondrion, plasma membrane, plastid	44.59	42.41
OQU87272	Sorghum	plasma membrane	42.94	33.91

Protein Annotations

MapMan:24.2.2.6	MapMan:25.3.2.1	EntrezGene:8083438	UniProt:C5YCS2	EnsemblPlants:EES11845	ProteinID:EES11845
ProteinID:EES11845.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005887	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0022891	GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf
PFAM:PF00083	PFscan:PS50850	PANTHER:PTHR24064	PANTHER:PTHR24064:SF227	EnsemblPlantsGene:SORBI_3006G026800	SUPFAM:SSF103473
TMHMM:TMhelix	UniParc:UPI0001A872C5	RefSeq:XP_002447517.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:-:4906326..4908342

Molecular Weight (calculated)

60436.0 Da

IEP (calculated)

6.671

GRAVY (calculated)

0.336

Length

545 amino acids

Sequence
(BLAST)

001: MFYRMLNVVT SSSATGSGGE TTTTRRARKQ QITVLNALDV ARTQLYHFIT IVIAGMGFFT DAYDLFSISL ITDLLGRIYY PDGKGKGSLP EDAAVAVNGI
101: ALVGTVLGQI FFGWLGDRMG RKRIYGVTLK LMVICSLASG LSFSRKSKDV IATLCFFRFW LGVGVGGDYP LSATIMSEYA NRRTRGAFIA AVFAMQGLGN
201: LAAGTMVLAI SARFKSTRAY ETDPYGQADY VWRIVLMLGA VPALLTYYWR MKMPETARYT ALIAKNLKQA ASDMTSVLEI DIPLGKEEMD ALAIQDEFGL
301: FSMEFVQRYG RELLSTTMCW LLLDIVFYSL NLFMKEFFSD IGWFEDVEGP LEHTYAIART QAIIVLAGTL PGYLFTVIFI DKLGRTRIQI VGFTMMTILM
401: LCLAGPYNFW KNNKSTKIGF AFLYALVFFF ANFGPNSTTF ILPTEIFPTR LRSTCHGISG AGGKIGAIFG VLWFLRCPIS IQNSLLMLAG CNLVGVMFTL
501: ALPESKGMSL EDITGEIDDR DEELPFESPQ INGGEFIHSV DFDEH

Best Arabidopsis Sequence Match ( AT2G32830.1 )
(BLAST)

001: MAKKGKEVLN ALDAAKTQMY HFTAIVIAGM GFFTDAYDLF SISLVTKLLG RIYYHVDSSK KPGTLPPNVA AAVNGVAFCG TLAGQLFFGW LGDKLGRKKV
101: YGITLMLMVL CSLGSGLSFG HSANGVMATL CFFRFWLGFG IGGDYPLSAT IMSEYANKKT RGAFIAAVFA MQGFGILAGG IVSLIVSSTF DHAFKAPTYE
201: VDPVGSTVPQ ADYVWRIVLM FGAIPALLTY YWRMKMPETA RYTALVARNT KQAASDMSKV LQVDLIAEEE AQSNSNSSNP NFTFGLFTRE FARRHGLHLL
301: GTTTTWFLLD IAYYSSNLFQ KDIYTAIGWI PAAETMNAIH EVFTVSKAQT LIALCGTVPG YWFTVAFIDI LGRFFIQLMG FIFMTIFMFA LAIPYDHWRH
401: RENRIGFLIM YSLTMFFANF GPNATTFVVP AEIFPARLRS TCHGISAASG KAGAIVGAFG FLYAAQSSDS EKTDAGYPPG IGVRNSLLML ACVNFLGIVF
501: TLLVPESKGK SLEEISREDE EQSGGDTVVE MTVANSGRKV PV

Arabidopsis Description

PHT1-5Probable inorganic phosphate transporter 1-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYF4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.