Factsheet for TraesCS4A01G460100.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

golgi: 23128297
golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G026000.1	Wheat	endoplasmic reticulum, golgi	96.15	96.74
TraesCS7A01G029600.1	Wheat	plasma membrane	95.14	95.72
EER87721	Sorghum	endoplasmic reticulum	80.77	79.01
Os06t0110000-01	Rice	plasma membrane	76.72	74.9
Zm00001d045563_P001	Maize	endoplasmic reticulum	70.65	72.71
GSMUA_Achr10P...	Banana	cytosol	51.21	67.47
GSMUA_Achr3P27540_001	Banana	cytosol	53.85	66.5
CDY48265	Canola	endoplasmic reticulum, golgi	56.28	56.85
Bra005596.1-P	Field mustard	extracellular, golgi	56.28	56.85
CDY12205	Canola	endoplasmic reticulum, golgi	56.07	56.53
VIT_15s0021g00270.t01	Wine grape	endoplasmic reticulum, golgi	56.28	56.5
AT1G05160.1	Thale cress	endoplasmic reticulum	55.47	55.92
CDY46834	Canola	extracellular, golgi	55.26	55.71
Bra015394.1-P	Field mustard	extracellular, golgi	55.26	55.71
PGSC0003DMT400004597	Potato	endoplasmic reticulum, golgi	55.67	55.33
VIT_15s0021g00310.t01	Wine grape	endoplasmic reticulum	54.66	55.33
CDY49505	Canola	extracellular, golgi	54.86	55.31
AT2G32440.1	Thale cress	extracellular, golgi	54.66	55.21
Solyc01g080900.2.1	Tomato	endoplasmic reticulum, golgi	55.47	55.13
KRH11858	Soybean	endoplasmic reticulum	54.45	54.45
KRH36870	Soybean	extracellular, golgi	53.64	53.43
TraesCS6A01G106500.1	Wheat	cytosol	21.46	36.55
TraesCS7A01G505000.1	Wheat	golgi	31.58	35.06
TraesCS5A01G037600.1	Wheat	mitochondrion	36.03	34.97
TraesCS2A01G064400.1	Wheat	mitochondrion	33.6	34.51
TraesCS5A01G238000.1	Wheat	endoplasmic reticulum	30.77	29.75
TraesCS2A01G221400.1	Wheat	endoplasmic reticulum	27.94	28.63
TraesCS6A01G271300.1	Wheat	golgi	27.73	28.54
TraesCS2A01G439800.1	Wheat	endoplasmic reticulum, extracellular	28.14	28.43
TraesCS6A01G380600.1	Wheat	endoplasmic reticulum	27.53	28.1
TraesCS4A01G355800.1	Wheat	endoplasmic reticulum, extracellular	27.53	27.59
TraesCS3A01G375000.1	Wheat	endoplasmic reticulum, vacuole	26.32	26.58
TraesCS2A01G256600.1	Wheat	endoplasmic reticulum, vacuole	25.3	25.56
TraesCS4A01G012600.2	Wheat	endoplasmic reticulum	23.68	23.59
TraesCS1A01G197100.1	Wheat	endoplasmic reticulum, plasma membrane	21.66	21.15

Protein Annotations

Gene3D:1.10.630.10	MapMan:11.6.1.3	InterPro:Cyt_P450	InterPro:Cyt_P450_B	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0016705	GO:GO:0020037	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00359
PRINTS:PR00385	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF67	SUPFAM:SSF48264	SignalP:SignalP-noTM
EnsemblPlantsGene:TraesCS4A01G460100	EnsemblPlants:TraesCS4A01G460100.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:-:725669383..725673513

Molecular Weight (calculated)

55796.7 Da

IEP (calculated)

10.109

GRAVY (calculated)

-0.179

Length

494 amino acids

Sequence
(BLAST)

001: MGELVWAALA GVLVPLAAVA LDAAVRAAHA WYWTASLGAG RRGRLPPGDM GWPLVGGMWA FLRAFKSGRP DSFIDSFARR FRRAGLYRAF MFSSPTILVT
101: TPEACKQVLM DDDTFVTGWP KATVALIGPK SFVNMGYDEH RRLRKLTAAP INGFDALTSY LGFIDETVVT TLRGWADRGS DGHFEFLTEL RRMTFRIIVQ
201: IFMGGADERT AAELERTYTE LNYGMRAMAI DLPGFAYHKA IRARRRLVAA LQRVLDERRA RGCRKTAGVD MMDRLIAAED EGGRRLQDDE IIDVLVMYLN
301: AGHESSGHIT MWATVFLQEN PEILARAKAE QEAIMRSIPP GQKGLTLRDF RKMEYLSQVV DETLRFVNIS FVSFRQATRD VSVNGYLIPK GWKVQLWYRS
401: VHMDPQVYPH PNKFDPSRWE GPPPRAGTFL PFGLGTRLCP GNDLAKLEIS VFLHHFLLGY KLTRKNPNCR VRYLPHPRPV DNCLAKITRV SSSH

Best Arabidopsis Sequence Match ( AT2G32440.2 )
(BLAST)

001: MTETGLILMW FPLIILGLFV LKWVLKRVNV WIYVSKLGEK KHYLPPGDLG WPVIGNMWSF LRAFKTSDPE SFIQSYITRY GRTGIYKAHM FGYPCVLVTT
101: PETCRRVLTD DDAFHIGWPK STMKLIGRKS FVGISFEEHK RLRRLTSAPV NGPEALSVYI QFIEETVNTD LEKWSKMGEI EFLSHLRKLT FKVIMYIFLS
201: SESEHVMDSL EREYTNLNYG VRAMGINLPG FAYHRALKAR KKLVAAFQSI VTNRRNQRKQ NISSNRKDML DNLIDVKDEN GRVLDDEEII DLLLMYLNAG
301: HESSGHLTMW ATILMQEHPM ILQKAKEEQE RIVKKRAPGQ KLTLKETREM VYLSQVIDET LRVITFSLTA FREAKSDVQM DGYIIPKGWK VLTWFRNVHL
401: DPEIYPDPKK FDPSRWEGYT PKAGTFLPFG LGSHLCPGND LAKLEISIFL HHFLLKYRVE RSNPGCPVMF LPHNRPKDNC LARITRTMP

Arabidopsis Description

KAO2KAO2 [Source:UniProtKB/TrEMBL;Acc:A0A178VZF6]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.