Factsheet for TraesCS4A01G012600.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G291700.2	Wheat	endoplasmic reticulum, plasma membrane	95.16	95.16
TraesCS4D01G290400.1	Wheat	endoplasmic reticulum, plasma membrane	94.15	95.11
HORVU4Hr1G076010.2	Barley	endoplasmic reticulum	90.12	92.93
OQU83878	Sorghum	endoplasmic reticulum, golgi	65.52	67.71
Zm00001d048819_P001	Maize	plastid, vacuole	64.11	63.73
Os07t0519300-01	Rice	peroxisome, plastid	56.05	61.78
Os07t0519600-00	Rice	endoplasmic reticulum, golgi, vacuole	57.66	60.72
Os07t0519100-01	Rice	endoplasmic reticulum, golgi	58.06	60.13
Os07t0518500-02	Rice	plasma membrane	58.06	59.63
Os07t0517900-01	Rice	endoplasmic reticulum, extracellular	44.96	59.63
Os07t0520100-00	Rice	mitochondrion	52.62	54.72
PGSC0003DMT400057210	Potato	cytosol, mitochondrion, plastid	25.81	45.23
TraesCS2A01G221400.1	Wheat	endoplasmic reticulum	43.95	45.23
KRH73722	Soybean	endoplasmic reticulum, golgi, plastid	42.94	44.94
TraesCS6A01G380600.1	Wheat	endoplasmic reticulum	43.55	44.63
TraesCS2A01G439800.1	Wheat	endoplasmic reticulum, extracellular	43.35	43.97
VIT_19s0090g00140.t01	Wine grape	endoplasmic reticulum, golgi	41.13	43.04
VIT_00s0704g00020.t01	Wine grape	extracellular, golgi	41.53	42.92
VIT_19s0090g00190.t01	Wine grape	endoplasmic reticulum, golgi, plastid	32.26	42.9
VIT_00s0704g00030.t01	Wine grape	endoplasmic reticulum, golgi	40.93	42.29
Solyc07g064450.2.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	39.72	41.47
PGSC0003DMT400057212	Potato	golgi, plasma membrane	39.72	41.47
GSMUA_Achr7P16930_001	Banana	mitochondrion	44.76	40.22
TraesCS3A01G375000.1	Wheat	endoplasmic reticulum, vacuole	38.91	39.47
TraesCS2A01G256600.1	Wheat	endoplasmic reticulum, vacuole	38.51	39.06
TraesCS6A01G106500.1	Wheat	cytosol	17.14	29.31
TraesCS6A01G271300.1	Wheat	golgi	27.22	28.12
TraesCS5A01G238000.1	Wheat	endoplasmic reticulum	28.02	27.2
TraesCS4A01G355800.1	Wheat	endoplasmic reticulum, extracellular	25.2	25.36
TraesCS2A01G064400.1	Wheat	mitochondrion	24.4	25.16
TraesCS1A01G197100.1	Wheat	endoplasmic reticulum, plasma membrane	25.0	24.51
TraesCS7A01G029600.1	Wheat	plasma membrane	23.59	23.83
TraesCS4A01G460100.1	Wheat	golgi	23.59	23.68
TraesCS5A01G037600.1	Wheat	mitochondrion	24.19	23.58
TraesCS7A01G505000.1	Wheat	golgi	20.77	23.15

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0016705	GO:GO:0020037	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385
PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24286	PANTHER:PTHR24286:SF152	SUPFAM:SSF48264	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS4A01G012600	EnsemblPlants:TraesCS4A01G012600.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:+:7164898..7167550

Molecular Weight (calculated)

55835.4 Da

IEP (calculated)

9.708

GRAVY (calculated)

-0.041

Length

496 amino acids

Sequence
(BLAST)

001: MAYSILLGAV IALLVAAVLQ LFHKNFYRLY YSAYKLPPGN LGMPVIGSTF SLLRACRSNT DDQWFRDRIK KYGPVSTMSL FGSPTVLLAG PAANHFIFGN
101: DGLILTQTGA LRALVGRSVL ALTGSELKLV RSALQGYLKP EMVRRYVCKI DHEVRSHIEL NWVGRDSITL MILQVLPMVR RLSLAIICSV VLGQESATIK
201: EGLCTDFVTL GKAILSFPVN IPFTRFNKGM AASAKIRKAI TNIAHKREES LLQEANATSD NDFISYMLIL RSQGAHSLTL EDIVDNTMGL IVGAHETTSA
301: LITFMIRYLY NEPDILDKVT REQDEIAQNK NPKDALTWDD VAKMKYTWKV AMETLRTIPP VFGSFRTTTK DIEYQGYHIP KGWKVFAAQS VTHMDSQFFH
401: EPNKFNPSRF EKSAPPYCYM PFGGGPRMCP GNVFARVETM VAMHYLVRQF RWEITCEKET YKRDPKPTPI LGLPIKLKLR PLAKNLQVTT MDTEIG

Best Arabidopsis Sequence Match ( AT5G36110.1 )
(BLAST)

001: MYMAIMIILF LSSILLSLLL LLRKHLSHFS YPNLPPGNTG LPLIGESFSF LSAGRQGHPE KFITDRVRRF SSSSSCVFKT HLFGSPTAVV TGASGNKFLF
101: TNENKLVVSW WPDSVNKIFP SSMQTSSKEE ARKLRMLLSQ FMKPEALRRY VGVMDEIAQR HFETEWANQD QVIVFPLTKK FTFSIACRSF LSMEDPARVR
201: QLEEQFNTVA VGIFSIPIDL PGTRFNRAIK ASRLLRKEVS AIVRQRKEEL KAGKALEEHD ILSHMLMNIG ETKDEDLADK IIGLLIGGHD TASIVCTFVV
301: NYLAEFPHVY QRVLQEQKEI LKEKKEKEGL RWEDIEKMRY SWNVACEVMR IVPPLSGTFR EAIDHFSFKG FYIPKGWKLY WSATATHMNP DYFPEPERFE
401: PNRFEGSGPK PYTYVPFGGG PRMCPGKEYA RLEILIFMHN LVNRFKWEKV FPNENKIVVD PLPIPDKGLP IRIFPQS

Arabidopsis Description

CYP716A1Cytochrome P450, family 716, subfamily A, polypeptide 1 [Source:UniProtKB/TrEMBL;Acc:Q9LVY7]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.