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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d048819_P001 Maize plastid, vacuole 87.29 83.97
HORVU4Hr1G076010.2 Barley endoplasmic reticulum 66.88 66.74
TraesCS4D01G290400.1 Wheat endoplasmic reticulum, plasma membrane 67.71 66.19
TraesCS4B01G291700.2 Wheat endoplasmic reticulum, plasma membrane 67.71 65.52
TraesCS4A01G012600.2 Wheat endoplasmic reticulum 67.71 65.52
Os07t0519600-00 Rice endoplasmic reticulum, golgi, vacuole 59.58 60.72
Os07t0519300-01 Rice peroxisome, plastid 56.67 60.44
Os07t0518500-02 Rice plasma membrane 59.38 59.01
Os07t0519100-01 Rice endoplasmic reticulum, golgi 58.75 58.87
Os07t0517900-01 Rice endoplasmic reticulum, extracellular 44.38 56.95
Os07t0520100-00 Rice mitochondrion 53.33 53.67
OQU90022 Sorghum peroxisome, plastid, vacuole 49.38 46.75
EES17165 Sorghum endoplasmic reticulum, golgi 47.08 45.47
KRH73722 Soybean endoplasmic reticulum, golgi, plastid 43.33 43.88
PGSC0003DMT400057210 Potato cytosol, mitochondrion, plastid 25.83 43.82
VIT_19s0090g00140.t01 Wine grape endoplasmic reticulum, golgi 43.12 43.67
EER99530 Sorghum endoplasmic reticulum, golgi 45.0 43.64
VIT_00s0704g00020.t01 Wine grape extracellular, golgi 41.67 41.67
EER88867 Sorghum endoplasmic reticulum, plasma membrane 41.25 41.08
Solyc07g064450.2.1 Tomato endoplasmic reticulum, plasma membrane, plastid 40.62 41.05
VIT_00s0704g00030.t01 Wine grape endoplasmic reticulum, golgi 41.04 41.04
PGSC0003DMT400057212 Potato golgi, plasma membrane 40.21 40.63
VIT_19s0090g00190.t01 Wine grape endoplasmic reticulum, golgi, plastid 31.46 40.48
GSMUA_Achr7P16930_001 Banana mitochondrion 44.58 38.77
EES05661 Sorghum golgi 28.96 29.08
EER93143 Sorghum endoplasmic reticulum, extracellular 28.75 29.05
EER99010 Sorghum endoplasmic reticulum, extracellular 27.92 26.69
EES15128 Sorghum extracellular, golgi 27.29 26.63
EER87721 Sorghum endoplasmic reticulum 23.75 22.57
KXG20998 Sorghum plastid 26.04 21.48
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13UniProt:A0A1Z5RJH3InterPro:Cyt_P450InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sf
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005506GO:GO:0008150GO:GO:0008152
GO:GO:0016705GO:GO:0020037GO:GO:0055114InterPro:IPR036396EnsemblPlants:OQU83878ProteinID:OQU83878
ProteinID:OQU83878.1PFAM:PF00067PRINTS:PR00463PANTHER:PTHR24286PANTHER:PTHR24286:SF152EnsemblPlantsGene:SORBI_3005G192500
SUPFAM:SSF48264SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI000B426973SEG:seg:
Description
hypothetical protein
Coordinates
chr5:-:67609674..67616966
Molecular Weight (calculated)
54141.1 Da
IEP (calculated)
10.190
GRAVY (calculated)
-0.093
Length
480 amino acids
Sequence
(BLAST)
001: MAFIVLLAAA AAVIAFVLHL ATKNHRSHPT YSLPPGNLGI PVIGQTFSLL HALRTNTDDR WFRARIKRYG PVSKMSVLGS PTVLLAGTAA NHFIFTNEDL
101: ILTQTRALRS LLRRSILTLT GDKLKQVRSA LQGYLRPEMV RRYVGKMDIE VRRQLKLNWV GRSTVNVLPM ARNLTLGVIC SVVFGEEAAT IVDALGTDFQ
201: LLGDAILSFP VNIPFTRFGK GMRSSAKIRE AVRKFAKKRE ESLLEERCTI STTDFVTYML ILRSKGAHSI TLEDIVDNVM GIIIGAHGTT SALITFMMRH
301: LANEPDVLAK ITEEQDEIAN KKGTDGALTW EHVSSMKYTW RVALETLRTV PPVFGSFRTA TKDIEYQGYH IPKGWKVFAA QSITHMDSRF FTEPTKFDPS
401: RFEKRSSIPP YSFLPFGGGP RMCPRTEFSR VETMVAMHYL VTQFRWKLCF KDEAYKKDPK PTPVFGCPVE LELREPYNDL
Best Arabidopsis Sequence Match ( AT5G36110.1 )
(BLAST)
001: MYMAIMIILF LSSILLSLLL LLRKHLSHFS YPNLPPGNTG LPLIGESFSF LSAGRQGHPE KFITDRVRRF SSSSSCVFKT HLFGSPTAVV TGASGNKFLF
101: TNENKLVVSW WPDSVNKIFP SSMQTSSKEE ARKLRMLLSQ FMKPEALRRY VGVMDEIAQR HFETEWANQD QVIVFPLTKK FTFSIACRSF LSMEDPARVR
201: QLEEQFNTVA VGIFSIPIDL PGTRFNRAIK ASRLLRKEVS AIVRQRKEEL KAGKALEEHD ILSHMLMNIG ETKDEDLADK IIGLLIGGHD TASIVCTFVV
301: NYLAEFPHVY QRVLQEQKEI LKEKKEKEGL RWEDIEKMRY SWNVACEVMR IVPPLSGTFR EAIDHFSFKG FYIPKGWKLY WSATATHMNP DYFPEPERFE
401: PNRFEGSGPK PYTYVPFGGG PRMCPGKEYA RLEILIFMHN LVNRFKWEKV FPNENKIVVD PLPIPDKGLP IRIFPQS
Arabidopsis Description
CYP716A1Cytochrome P450, family 716, subfamily A, polypeptide 1 [Source:UniProtKB/TrEMBL;Acc:Q9LVY7]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.