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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • plastid 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d017762_P004 Maize golgi 93.31 94.89
Zm00001d051554_P002 Maize golgi 91.63 92.21
TraesCS6B01G298500.1 Wheat golgi 85.56 85.92
TraesCS6D01G243800.1 Wheat golgi 85.77 85.77
HORVU6Hr1G068690.1 Barley golgi 84.31 85.38
HORVU0Hr1G016780.2 Barley golgi 84.31 85.38
TraesCS6A01G271300.1 Wheat golgi 85.15 84.79
Os02t0703600-01 Rice golgi 74.48 84.36
GSMUA_Achr7P07200_001 Banana cytosol, plastid 69.87 77.67
GSMUA_Achr4P18430_001 Banana cytosol, plastid 68.2 75.64
GSMUA_Achr4P21760_001 Banana endoplasmic reticulum 70.71 71.31
CDY01590 Canola endoplasmic reticulum 66.32 67.88
AT5G45340.1 Thale cress extracellular, golgi 65.69 67.82
Bra013386.1-P Field mustard endoplasmic reticulum 65.48 67.75
Solyc08g075320.2.1 Tomato endoplasmic reticulum, extracellular 65.27 67.68
Bra012551.1-P Field mustard endoplasmic reticulum, golgi 66.11 67.67
PGSC0003DMT400004951 Potato extracellular, golgi 65.27 67.53
CDX98611 Canola endoplasmic reticulum, extracellular 65.9 67.45
KRH76457 Soybean extracellular, golgi 65.48 67.02
CDY38984 Canola endoplasmic reticulum, extracellular 65.9 67.02
KRH39776 Soybean extracellular, golgi 65.48 66.88
VIT_02s0087g00710.t01 Wine grape endoplasmic reticulum, plasma membrane 65.69 66.81
CDY13061 Canola endoplasmic reticulum, golgi 65.06 66.74
Bra027602.1-P Field mustard endoplasmic reticulum, golgi 65.06 66.74
CDY67937 Canola endoplasmic reticulum, extracellular 65.06 66.74
Solyc08g005610.2.1 Tomato extracellular, golgi 65.48 66.74
PGSC0003DMT400047537 Potato extracellular, golgi 65.48 66.74
CDY23132 Canola endoplasmic reticulum, golgi 64.85 66.52
CDY39421 Canola endoplasmic reticulum, extracellular 65.27 66.38
CDX87793 Canola extracellular, golgi 65.06 66.17
Bra025083.1-P Field mustard endoplasmic reticulum 64.44 65.53
Bra021965.1-P Field mustard endoplasmic reticulum, golgi 60.04 65.38
KRH07768 Soybean endoplasmic reticulum, extracellular 63.18 64.95
KRH07247 Soybean endoplasmic reticulum, extracellular 62.97 64.32
CDY68433 Canola plastid 65.48 62.98
AT4G19230.2 Thale cress endoplasmic reticulum, golgi 63.6 62.81
CDX99387 Canola plastid 65.06 62.58
KRH04012 Soybean endoplasmic reticulum, extracellular 58.37 59.87
KRH57290 Soybean cytosol 38.49 56.79
EER99010 Sorghum endoplasmic reticulum, extracellular 54.39 51.79
EES15128 Sorghum extracellular, golgi 51.67 50.2
EER93143 Sorghum endoplasmic reticulum, extracellular 31.17 31.37
EER88867 Sorghum endoplasmic reticulum, plasma membrane 30.54 30.29
EER99530 Sorghum endoplasmic reticulum, golgi 30.54 29.49
OQU83878 Sorghum endoplasmic reticulum, golgi 29.08 28.96
OQU90022 Sorghum peroxisome, plastid, vacuole 29.92 28.21
EER87721 Sorghum endoplasmic reticulum 29.71 28.12
EES17165 Sorghum endoplasmic reticulum, golgi 29.08 27.97
KXG20998 Sorghum plastid 28.03 23.02
Protein Annotations
Gene3D:1.10.630.10MapMan:11.1.3.2EntrezGene:8073163UniProt:C5Y0C5InterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfEnsemblPlants:EES05661ProteinID:EES05661ProteinID:EES05661.1GO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0006629GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009687GO:GO:0009987GO:GO:0010268
GO:GO:0016125GO:GO:0016132GO:GO:0016491GO:GO:0016705GO:GO:0016709GO:GO:0020037
GO:GO:0046872GO:GO:0055114InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463
ScanProsite:PS00086PANTHER:PTHR24286PANTHER:PTHR24286:SF10EnsemblPlantsGene:SORBI_3004G268700SUPFAM:SSF48264unigene:Sbi.12075
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A85DF1RefSeq:XP_002452685.1SEG:seg:
Description
hypothetical protein
Coordinates
chr4:+:61294518..61297495
Molecular Weight (calculated)
53744.3 Da
IEP (calculated)
9.845
GRAVY (calculated)
-0.169
Length
478 amino acids
Sequence
(BLAST)
001: MGALLLFVCL LAPIVLLCAA VRGSRKRRSA SPASSCGKAL PLPPGSMGWP YVGETFQLYS SKNPNVFFAR KQNRYGPIFK THILGCPCVM VSSPEAARFV
101: LVTQAHLFKP TFPASKERML GPQAIFFQQG DYHTHLRRLV SRAFSPEAIR GSVPAIEAVA LRSLDSWDGQ LVNTFQEMKL YALNVALLSI FGEEEMRYIE
201: ELKQCYLTLE KGYNSMPVNL PGTLFHKAMK ARKRLGAIVA HIIEARRGRQ QQQQQQQRGR DLLASFLDDR EALTDAQIAD NVIGVIFAAR DTTASVLTWM
301: VKFLGDNPAV LKAVIEEQQE IARSKGSSSD EPLTWADTRR MRMTSRVIQE TMRVASILSF TFREAVEDVE YQGYLIPKGW KVMPLFRNIH HSPDHFPCPE
401: KFDPSRFEVA PKPNTFMPFG NGTHSCPGNE LAKLEMLVLF HHLATKYRWS TSKSESGVQF GPFALPLNGL PMTFLRKD
Best Arabidopsis Sequence Match ( AT4G19230.1 )
(BLAST)
001: MDISALFLTL FAGSLFLYFL RCLISQRRFG SSKLPLPPGT MGWPYVGETF QLYSQDPNVF FQSKQKRYGS VFKTHVLGCP CVMISSPEAA KFVLVTKSHL
101: FKPTFPASKE RMLGKQAIFF HQGDYHAKLR KLVLRAFMPE SIRNMVPDIE SIAQDSLRSW EGTMINTYQE MKTYTFNVAL LSIFGKDEVL YREDLKRCYY
201: ILEKGYNSMP VNLPGTLFHK SMKARKELSQ ILARILSERR QNGSSHNDLL GSFMGDKEEL TDEQIADNII GVIFAARDTT ASVMSWILKY LAENPNVLEA
301: VTEEQMAIRK DKEEGESLTW GDTKKMPLTS RVIQETLRVA SILSFTFREA VEDVEYEGYL IPKGWKVLPL FRNIHHSADI FSNPGKFDPS RFEVAPKPNT
401: FMPFGNGTHS CPGNELAKLE MSIMIHHLTT KYSWSIVGAS DGIQYGPFAL PQNGLPIVLA RKPEIEV
Arabidopsis Description
CYP707A1Cytochrome P450, family 707, subfamily A, polypeptide 1 [Source:UniProtKB/TrEMBL;Acc:A8MRX5]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.