Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d034769_P001 Maize endoplasmic reticulum, golgi, vacuole 94.53 93.74
HORVU5Hr1G118020.4 Barley endoplasmic reticulum 79.37 78.05
TraesCS5D01G516400.1 Wheat endoplasmic reticulum, extracellular 78.74 76.64
TraesCS4A01G355800.1 Wheat endoplasmic reticulum, extracellular 79.16 76.27
TraesCS5B01G516300.1 Wheat endoplasmic reticulum 78.11 75.71
VIT_18s0076g00340.t01 Wine grape mitochondrion 62.95 73.28
TraesCS2D01G118800.1 Wheat cytosol 56.84 71.81
KRH08716 Soybean endoplasmic reticulum 67.37 71.75
PGSC0003DMT400002095 Potato cytosol 66.53 71.01
KRH70321 Soybean endoplasmic reticulum, golgi 70.32 70.32
GSMUA_Achr9P29620_001 Banana cytosol, mitochondrion, plastid 65.47 69.73
KRH08719 Soybean cytosol 63.37 68.25
Solyc04g071150.2.1 Tomato endoplasmic reticulum 68.42 68.13
KRH70318 Soybean endoplasmic reticulum 67.16 66.6
PGSC0003DMT400091698 Potato cytosol, nucleus, plastid 55.16 63.44
KRH07785 Soybean cytosol 22.95 56.77
EES05661 Sorghum golgi 31.37 31.17
EES17165 Sorghum endoplasmic reticulum, golgi 32.21 30.78
EER99530 Sorghum endoplasmic reticulum, golgi 32.0 30.71
OQU90022 Sorghum peroxisome, plastid, vacuole 31.79 29.78
OQU83878 Sorghum endoplasmic reticulum, golgi 29.05 28.75
EER87721 Sorghum endoplasmic reticulum 30.32 28.51
EES15128 Sorghum extracellular, golgi 29.47 28.46
EER99010 Sorghum endoplasmic reticulum, extracellular 29.47 27.89
EER88867 Sorghum endoplasmic reticulum, plasma membrane 28.21 27.8
KXG20998 Sorghum plastid 32.84 26.8
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13EntrezGene:8080193UniProt:C5WTY2InterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfEnsemblPlants:EER93143ProteinID:EER93143ProteinID:EER93143.1GO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0006629GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0010268GO:GO:0016125GO:GO:0016132
GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872GO:GO:0055114InterPro:IPR036396
PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24286PANTHER:PTHR24286:SF160
EnsemblPlantsGene:SORBI_3001G022700SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI0001A828F8RefSeq:XP_002466145.1SEG:seg
Description
hypothetical protein
Coordinates
chr1:-:1826823..1829149
Molecular Weight (calculated)
53095.5 Da
IEP (calculated)
9.923
GRAVY (calculated)
-0.136
Length
475 amino acids
Sequence
(BLAST)
001: MAVFGAPVLV AVALACAGLL WLRSRISSSK EMRDIPGTMG WPVIGETFSF ISDFSSPAGI LSFMRDRQRR FGKVFKTYVL GRITVFMTGR DAAKILLSGK
101: DGVVSLNLFY TGKQVLGPTS LLTTNGDEHK KLRRLIGEPL SIDALKKYLG FINDLAVQTL DTWHGRSRVL VLEEASSFTL KVIANMLVSL EPEGEEQEKF
201: RANFKVISSS FASLPLKLPG TAFHRGLKAR NRMYAMLDSV IARRRIRDGG GEAPSDFLQT LLRKHAGDEA DKLTDAQLKD NILTLLVAGH DTTTAGLTWL
301: VKFLGENPDV LAKLREEHLE IKERLNGSSR LSWSDVNNMP YTNKVMNETL RRATILPWFS RKAAQDFSID GYEIKKGTSV NLDVVSIHHD PSVFADPERF
401: NPNRFDETLK PYSFLGFGSG PRMCPGMSLA KLEICVFVHH LVCRYSWKPL ENDDTVQPTL VRMPKNKYPI IPTAL
Best Arabidopsis Sequence Match ( AT1G19630.1 )
(BLAST)
001: MEHLCLCLVL CAAMLTLGKF LKIMFQDRKK STAGVPPGSD GFPVIGETLQ FMLSVNSGKG FYEFVRSRRI RYGSCFRTSL FGETHVFLST TESARLVLNN
101: DSGMFTKRYI KSIGELVGDR SLLCAPQHHH KILRSRLINL FSKRSTALMV RHFDELVVDA LGGWEHRGTV VLLTDLLQIT FKAMCKMLVS LEKEEELGSM
201: QRDVGFVCEA MLAFPLNLPW TRFHKGIMAR GRVMEMLEKI IRERRNEINS HNNHHEDFLQ QLLAVDNDTP QLTDAEIKDN ILTMIIAGQD TTASALTWMV
301: KYLGENQKVL DILIEEQSQI TKKASNKPFL ELEDLSEMPY ASKMVKESLR MASVVPWFPR LVLQDCEMEG YKIKKGWNIN IDARSIHLDP TVYSEPHKFN
401: PLRFEEEAKA NSFLAFGMGG RTCLGLALAK AMMLVFLHRF ITTYRWEVVD EDPSIEKWTL FARLKSGYPI RVSRRL
Arabidopsis Description
CYP722A1Cytochrome P450, family 722, subfamily A, polypeptide 1 [Source:UniProtKB/TrEMBL;Acc:F4HP86]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.