Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d050021_P001 Maize extracellular, golgi, plasma membrane 83.94 81.94
GSMUA_Achr8P23280_001 Banana cytosol 22.76 70.0
EER99010 Sorghum endoplasmic reticulum, extracellular 66.87 65.54
Os08t0472800-01 Rice endoplasmic reticulum, golgi 67.68 65.29
VIT_03s0063g00380.t01 Wine grape cytosol 55.89 63.22
GSMUA_Achr3P06970_001 Banana endoplasmic reticulum, golgi 60.98 63.16
GSMUA_Achr9P15310_001 Banana golgi 61.38 62.79
VIT_18s0001g10500.t01 Wine grape extracellular, golgi 59.35 62.13
CDY63039 Canola cytosol 17.68 61.7
Bra001741.1-P Field mustard cytosol 54.88 59.6
KRH50278 Soybean endoplasmic reticulum, golgi 57.32 59.49
AT3G19270.2 Thale cress extracellular, golgi 56.3 59.19
KRH71139 Soybean endoplasmic reticulum, golgi 56.71 58.86
PGSC0003DMT400066337 Potato endoplasmic reticulum 56.5 58.16
CDX82303 Canola extracellular, golgi 56.1 58.11
Bra022407.1-P Field mustard cytosol 53.46 58.06
GSMUA_Achr8P23290_001 Banana golgi, vacuole 37.8 57.41
PGSC0003DMT400020589 Potato endoplasmic reticulum 55.08 57.05
CDX92318 Canola golgi 54.47 56.66
KRH15360 Soybean endoplasmic reticulum 55.49 56.64
Solyc01g108210.2.1 Tomato endoplasmic reticulum, golgi 54.47 56.3
Solyc04g078900.2.1 Tomato endoplasmic reticulum, extracellular 54.47 56.3
VIT_07s0031g00690.t01 Wine grape cytosol 54.88 54.66
KRH05684 Soybean endoplasmic reticulum, golgi, plasma membrane 56.5 54.3
CDX99244 Canola golgi 52.44 52.33
EES05661 Sorghum golgi 50.2 51.67
KRH26021 Soybean cytosol, mitochondrion 22.15 51.17
EER99530 Sorghum endoplasmic reticulum, golgi 31.1 30.91
EER87721 Sorghum endoplasmic reticulum 31.1 30.3
EER88867 Sorghum endoplasmic reticulum, plasma membrane 29.67 30.29
OQU90022 Sorghum peroxisome, plastid, vacuole 30.69 29.78
EES17165 Sorghum endoplasmic reticulum, golgi 30.08 29.78
EER93143 Sorghum endoplasmic reticulum, extracellular 28.46 29.47
OQU83878 Sorghum endoplasmic reticulum, golgi 26.63 27.29
KXG20998 Sorghum plastid 28.05 23.71
Protein Annotations
Gene3D:1.10.630.10MapMan:11.1.3.2EntrezGene:8083537UniProt:C5YMA6InterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfEnsemblPlants:EES15128ProteinID:EES15128ProteinID:EES15128.1GO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0006629GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0010268GO:GO:0010295GO:GO:0016125
GO:GO:0016132GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872GO:GO:0055114
InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24286
PANTHER:PTHR24286:SF167EnsemblPlantsGene:SORBI_3007G156300SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI0001A87CE7RefSeq:XP_002445633.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr7:-:59051433..59056905
Molecular Weight (calculated)
55125.9 Da
IEP (calculated)
9.649
GRAVY (calculated)
-0.084
Length
492 amino acids
Sequence
(BLAST)
001: MAFLLAVACI YIVFSLLTLL VLLVVSRRRT TAVTAGKTGG ATTEQDHNKL PPGSLGLPII GETLQLYTQN PKDFFASRLK RYGEVFKTHV LGCPCVILAS
101: PEAARMVLVS QAHLFKPTYP PSKERMIGAQ ALFFHQGDYH RRLRRLVQSW VGPDALRALV PDVEAAVAST LRRWEGNVTS TFHTMKTLTF DVGVVTIFGR
201: RLADHVKEEL RKHYLIVEKG YNSFPIPVPF TSYCQAIKAR RRLGEILSGI LAERRRARSG DLGGGGDDDD LLNTLMRYRD DTGAALSDDQ VADNVIGVLF
301: AAQDTTASVL TWILKFLHDN PKLLEAVKAE QMAIYEENDG GKLPLTWAQT RRMPITHLVI LESLRMASII SFTFREAVED VHYQGFLIPK GWKVMPLFRN
401: MHYSPDYFQD PHKFDPSRFK VTPRPGTFLP FGSGVHACPG NDLAKLEMLV LIHRLVTTYR WEVEGSSDDV TYSPFPVPKR GLQARLTRAA TA
Best Arabidopsis Sequence Match ( AT3G19270.2 )
(BLAST)
001: MAEIWFLVVP ILILCLLLVR VIVSKKKKNS RGKLPPGSMG WPYLGETLQL YSQNPNVFFT SKQKRYGEIF KTRILGYPCV MLASPEAARF VLVTHAHMFK
101: PTYPRSKEKL IGPSALFFHQ GDYHSHIRKL VQSSFYPETI RKLIPDIEHI ALSSLQSWAN MPIVSTYQEM KKFAFDVGIL AIFGHLESSY KEILKHNYNI
201: VDKGYNSFPM SLPGTSYHKA LMARKQLKTI VSEIICERRE KRALQTDFLG HLLNFKNEKG RVLTQEQIAD NIIGVLFAAQ DTTASCLTWI LKYLHDDQKL
301: LEAVKAEQKA IYEENSREKK PLTWRQTRNM PLTHKVIVES LRMASIISFT FREAVVDVEY KGYLIPKGWK VMPLFRNIHH NPKYFSNPEV FDPSRFEVNP
401: KPNTFMPFGS GVHACPGNEL AKLQILIFLH HLVSNFRWEV KGGEKGIQYS PFPIPQNGLP ATFRRHSL
Arabidopsis Description
CYP707A4CYP707A4 [Source:UniProtKB/TrEMBL;Acc:A0A178VA28]
SUBAcon: [golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.