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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d006503_P001 Maize endoplasmic reticulum 90.3 90.49
Os07t0520300-01 Rice golgi, plastid 71.72 71.29
EES17165 Sorghum endoplasmic reticulum, golgi 62.42 62.17
OQU90022 Sorghum peroxisome, plastid, vacuole 63.43 61.93
VIT_19s0090g00140.t01 Wine grape endoplasmic reticulum, golgi 52.73 55.06
VIT_19s0090g00190.t01 Wine grape endoplasmic reticulum, golgi, plastid 41.21 54.69
KRH73722 Soybean endoplasmic reticulum, golgi, plastid 50.91 53.16
PGSC0003DMT400057212 Potato golgi, plasma membrane 50.1 52.21
Solyc07g064450.2.1 Tomato endoplasmic reticulum, plasma membrane, plastid 49.9 52.0
PGSC0003DMT400057210 Potato cytosol, mitochondrion, plastid 29.29 51.24
GSMUA_Achr7P16930_001 Banana mitochondrion 56.77 50.91
VIT_00s0704g00030.t01 Wine grape endoplasmic reticulum, golgi 48.89 50.42
VIT_00s0704g00020.t01 Wine grape extracellular, golgi 48.48 50.0
EER88867 Sorghum endoplasmic reticulum, plasma membrane 48.08 49.38
OQU83878 Sorghum endoplasmic reticulum, golgi 43.64 45.0
Os07t0491800-01 Rice cytosol, mitochondrion, nucleus 33.74 32.36
EER93143 Sorghum endoplasmic reticulum, extracellular 30.71 32.0
EES15128 Sorghum extracellular, golgi 30.91 31.1
EES05661 Sorghum golgi 29.49 30.54
EER99010 Sorghum endoplasmic reticulum, extracellular 30.3 29.88
EER87721 Sorghum endoplasmic reticulum 28.08 27.52
KXG20998 Sorghum plastid 26.26 22.34
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13EntrezGene:8056319UniProt:C5XBH7InterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfEnsemblPlants:EER99530ProteinID:EER99530ProteinID:EER99530.1GO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0006629GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0010268GO:GO:0016125GO:GO:0016132
GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872GO:GO:0055114InterPro:IPR036396
PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24286PANTHER:PTHR24286:SF51
EnsemblPlantsGene:SORBI_3002G336100SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI0001A84221RefSeq:XP_002463009.1SEG:seg
Description
hypothetical protein
Coordinates
chr2:-:70408064..70410270
Molecular Weight (calculated)
54989.2 Da
IEP (calculated)
8.862
GRAVY (calculated)
-0.024
Length
495 amino acids
Sequence
(BLAST)
001: MAASVGVALL VAFLTPVVVY LLTRHPNKKP LPGNLPPGSL GLPMIGQSLG LLRAMRSNTG ERWLRDRVDR YGPVSKLSLF GVPTVFVTGP AANKLVFASD
101: ALAPKQPRCL PLILGRRNIL ELVGDDYRRV RGAMMQFLKP DMLRRYVGTI DAEVARHLEG RWAGRRTVAV LPLMKLLTFD IIATLLFGLE RGAVRERLAA
201: AFADMLEGMW SVPLDLPFTT FRKSLRASAR ARRVLEATLA EKRARLERGE ASPADDLVSC LASLRAEAEG DGGERLLTDE EIVDNAMVVL VAGHDTSSVL
301: MTFMIRHLAG DPATLAAMVQ EHDEIAKNKA DGEALTWEDL HGMRFTWRVA LETLRMIPPI FGSFRRAMED IEFDGYCIPK GWQVFWASSV THMDPSIFPD
401: PDKFQASRFE SQAPPYSFVA FGAGQRLCAG IEFARVETLV TMHRLLRRFR WRLCCEDKDN TFVRDPMPSP LNGLPIELQS RDMASPTPSK SACGL
Best Arabidopsis Sequence Match ( AT5G36110.1 )
(BLAST)
001: MYMAIMIILF LSSILLSLLL LLRKHLSHFS YPNLPPGNTG LPLIGESFSF LSAGRQGHPE KFITDRVRRF SSSSSCVFKT HLFGSPTAVV TGASGNKFLF
101: TNENKLVVSW WPDSVNKIFP SSMQTSSKEE ARKLRMLLSQ FMKPEALRRY VGVMDEIAQR HFETEWANQD QVIVFPLTKK FTFSIACRSF LSMEDPARVR
201: QLEEQFNTVA VGIFSIPIDL PGTRFNRAIK ASRLLRKEVS AIVRQRKEEL KAGKALEEHD ILSHMLMNIG ETKDEDLADK IIGLLIGGHD TASIVCTFVV
301: NYLAEFPHVY QRVLQEQKEI LKEKKEKEGL RWEDIEKMRY SWNVACEVMR IVPPLSGTFR EAIDHFSFKG FYIPKGWKLY WSATATHMNP DYFPEPERFE
401: PNRFEGSGPK PYTYVPFGGG PRMCPGKEYA RLEILIFMHN LVNRFKWEKV FPNENKIVVD PLPIPDKGLP IRIFPQS
Arabidopsis Description
CYP716A1Cytochrome P450, family 716, subfamily A, polypeptide 1 [Source:UniProtKB/TrEMBL;Acc:Q9LVY7]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.