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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 6
  • vacuole 4
  • plasma membrane 4
  • golgi 5
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d021639_P001 Maize endoplasmic reticulum 83.9 86.51
OQU90022 Sorghum peroxisome, plastid, vacuole 86.12 84.42
TraesCS5D01G269600.1 Wheat cytosol 63.58 72.81
Os07t0518100-01 Rice golgi, plastid 71.83 72.56
TraesCS2A01G439800.1 Wheat endoplasmic reticulum, extracellular 71.03 72.19
TraesCS2B01G461700.1 Wheat endoplasmic reticulum 70.62 71.63
TraesCS6D01G365600.1 Wheat endoplasmic reticulum 70.02 71.6
TraesCS6D01G365400.1 Wheat endoplasmic reticulum 70.02 71.6
TraesCS2A01G221400.1 Wheat endoplasmic reticulum 69.42 71.58
HORVU2Hr1G046210.1 Barley endoplasmic reticulum 69.42 71.58
TraesCS6A01G380600.1 Wheat endoplasmic reticulum 69.62 71.49
TraesCS2D01G439100.1 Wheat endoplasmic reticulum 70.42 71.43
TraesCS2D01G227200.1 Wheat endoplasmic reticulum 69.22 71.37
TraesCS6B01G419600.1 Wheat endoplasmic reticulum 69.42 71.13
HORVU2Hr1G102260.2 Barley endoplasmic reticulum 69.22 70.49
TraesCS6B01G419900.1 Wheat vacuole 68.41 70.39
TraesCSU01G216400.1 Wheat endoplasmic reticulum, extracellular 45.47 69.97
EER99530 Sorghum endoplasmic reticulum, golgi 62.17 62.42
TraesCS4B01G382300.2 Wheat endoplasmic reticulum 59.56 60.78
VIT_19s0090g00140.t01 Wine grape endoplasmic reticulum, golgi 52.52 55.06
VIT_19s0090g00190.t01 Wine grape endoplasmic reticulum, golgi, plastid 41.05 54.69
KRH73722 Soybean endoplasmic reticulum, golgi, plastid 51.31 53.8
PGSC0003DMT400057212 Potato golgi, plasma membrane 50.5 52.84
VIT_00s0704g00020.t01 Wine grape extracellular, golgi 50.3 52.08
PGSC0003DMT400057210 Potato cytosol, mitochondrion, plastid 29.38 51.59
Solyc07g064450.2.1 Tomato endoplasmic reticulum, plasma membrane, plastid 49.09 51.37
VIT_00s0704g00030.t01 Wine grape endoplasmic reticulum, golgi 49.5 51.25
EER88867 Sorghum endoplasmic reticulum, plasma membrane 48.29 49.79
GSMUA_Achr7P16930_001 Banana mitochondrion 53.12 47.83
OQU83878 Sorghum endoplasmic reticulum, golgi 45.47 47.08
EER93143 Sorghum endoplasmic reticulum, extracellular 30.78 32.21
EER99010 Sorghum endoplasmic reticulum, extracellular 30.78 30.48
EES15128 Sorghum extracellular, golgi 29.78 30.08
EES05661 Sorghum golgi 27.97 29.08
EER87721 Sorghum endoplasmic reticulum 29.38 28.91
KXG20998 Sorghum plastid 26.36 22.51
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13EntrezGene:8068807UniProt:C5YPJ7InterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfEnsemblPlants:EES17165ProteinID:EES17165ProteinID:EES17165.1GO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0006629
GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0010268GO:GO:0016020
GO:GO:0016021GO:GO:0016125GO:GO:0016132GO:GO:0016491GO:GO:0016705GO:GO:0020037
GO:GO:0046872GO:GO:0055114InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463
ScanProsite:PS00086PANTHER:PTHR24286PANTHER:PTHR24286:SF61EnsemblPlantsGene:SORBI_3008G122800SUPFAM:SSF48264TMHMM:TMhelix
UniParc:UPI0001A88633RefSeq:XP_002443327.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr8:-:54551890..54554095
Molecular Weight (calculated)
55363.1 Da
IEP (calculated)
9.855
GRAVY (calculated)
0.044
Length
497 amino acids
Sequence
(BLAST)
001: MHIPLVEELR LASPMDSSLI LALILAVALA LLLHLLTSAN NKPRRAKQVP PGSLGLPVIG QSLSLLRAMR ANSGERWIQD RIHRYGPVSK LSLFGAPTVL
101: LAGPAANKFT FFSRALAMQQ PRSVQRILGE KSILELVGAD HKRIRGALAE FLKPDMLRLY VGKIDGEVRR HLDERWAGRT TVTVMPLMKR LTFDIISLLL
201: FGLQRGAPLQ DALAADFARV MDGIWAVPVN LPFTAFSRSL RASARARRLI AGILRETRAK LETGEASRSS DLIACLLSLT DHHSGAPLLS DKEIVDNSVV
301: ALVAGHDTSS ILMTFMVRQL ANDPDTLAAM VQEHDDIAKS KGDGEALDWE DLAKMKYTWR VALETLRLVP PMFGDFRRAL QDVEFDGYLI PKGWQVFWVA
401: SVTHMDPGIF PEPARFEPSR FENQSPPCSF VAFGGGPRIC VGMEFARIET LVTMHYLVRR FRWKLCCKKD TYARDPMPLP LHGLPIQLEH KVSPCVM
Best Arabidopsis Sequence Match ( AT5G36110.1 )
(BLAST)
001: MYMAIMIILF LSSILLSLLL LLRKHLSHFS YPNLPPGNTG LPLIGESFSF LSAGRQGHPE KFITDRVRRF SSSSSCVFKT HLFGSPTAVV TGASGNKFLF
101: TNENKLVVSW WPDSVNKIFP SSMQTSSKEE ARKLRMLLSQ FMKPEALRRY VGVMDEIAQR HFETEWANQD QVIVFPLTKK FTFSIACRSF LSMEDPARVR
201: QLEEQFNTVA VGIFSIPIDL PGTRFNRAIK ASRLLRKEVS AIVRQRKEEL KAGKALEEHD ILSHMLMNIG ETKDEDLADK IIGLLIGGHD TASIVCTFVV
301: NYLAEFPHVY QRVLQEQKEI LKEKKEKEGL RWEDIEKMRY SWNVACEVMR IVPPLSGTFR EAIDHFSFKG FYIPKGWKLY WSATATHMNP DYFPEPERFE
401: PNRFEGSGPK PYTYVPFGGG PRMCPGKEYA RLEILIFMHN LVNRFKWEKV FPNENKIVVD PLPIPDKGLP IRIFPQS
Arabidopsis Description
CYP716A1Cytochrome P450, family 716, subfamily A, polypeptide 1 [Source:UniProtKB/TrEMBL;Acc:Q9LVY7]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.