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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:plastid, secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU0Hr1G016780.2 Barley golgi 100.0 100.0
TraesCS6B01G298500.1 Wheat golgi 95.55 94.75
TraesCS6D01G243800.1 Wheat golgi 95.55 94.35
TraesCS6A01G271300.1 Wheat golgi 95.13 93.54
Zm00001d017762_P004 Maize golgi 85.81 86.17
EES05661 Sorghum golgi 85.38 84.31
Zm00001d051554_P002 Maize golgi 84.11 83.58
Os02t0703600-01 Rice golgi 74.36 83.18
GSMUA_Achr7P07200_001 Banana cytosol, plastid 69.49 76.28
GSMUA_Achr4P18430_001 Banana cytosol, plastid 67.37 73.78
GSMUA_Achr4P21760_001 Banana endoplasmic reticulum 70.34 70.04
PGSC0003DMT400004951 Potato extracellular, golgi 66.53 67.97
Solyc08g075320.2.1 Tomato endoplasmic reticulum, extracellular 66.31 67.9
Bra013386.1-P Field mustard endoplasmic reticulum 66.31 67.75
CDY01590 Canola endoplasmic reticulum 66.53 67.24
Bra012551.1-P Field mustard endoplasmic reticulum, golgi 66.53 67.24
PGSC0003DMT400047537 Potato extracellular, golgi 66.74 67.16
CDX98611 Canola endoplasmic reticulum, extracellular 66.31 67.02
VIT_02s0087g00710.t01 Wine grape endoplasmic reticulum, plasma membrane 66.74 67.02
Solyc08g005610.2.1 Tomato extracellular, golgi 66.53 66.95
KRH76457 Soybean extracellular, golgi 66.1 66.81
AT5G45340.1 Thale cress extracellular, golgi 65.47 66.74
KRH39776 Soybean extracellular, golgi 65.68 66.24
Bra027602.1-P Field mustard endoplasmic reticulum, golgi 65.25 66.09
CDY13061 Canola endoplasmic reticulum, golgi 65.25 66.09
KRH07768 Soybean endoplasmic reticulum, extracellular 65.04 66.02
CDY38984 Canola endoplasmic reticulum, extracellular 65.68 65.96
CDY23132 Canola endoplasmic reticulum, golgi 65.04 65.88
CDY67937 Canola endoplasmic reticulum, extracellular 65.04 65.88
KRH07247 Soybean endoplasmic reticulum, extracellular 64.83 65.38
CDY39421 Canola endoplasmic reticulum, extracellular 65.04 65.32
CDX87793 Canola extracellular, golgi 64.62 64.89
Bra025083.1-P Field mustard endoplasmic reticulum 64.19 64.47
Bra021965.1-P Field mustard endoplasmic reticulum, golgi 59.53 64.01
CDY68433 Canola plastid 66.1 62.78
AT4G19230.2 Thale cress endoplasmic reticulum, golgi 63.98 62.4
CDX99387 Canola plastid 65.47 62.17
KRH04012 Soybean endoplasmic reticulum, extracellular 60.17 60.94
KRH57290 Soybean cytosol 40.47 58.95
HORVU5Hr1G068330.4 Barley golgi 53.18 47.81
HORVU5Hr1G118020.4 Barley endoplasmic reticulum 31.36 30.64
HORVU2Hr1G046210.1 Barley endoplasmic reticulum 29.66 29.05
HORVU2Hr1G102260.2 Barley endoplasmic reticulum 29.66 28.69
HORVU2Hr1G064640.1 Barley endoplasmic reticulum, plasma membrane 30.08 28.57
HORVU4Hr1G076010.2 Barley endoplasmic reticulum 28.81 28.27
HORVU5Hr1G009500.1 Barley golgi 28.6 27.72
HORVU2Hr1G011170.2 Barley golgi 28.6 27.61
HORVU7Hr1G022480.1 Barley endoplasmic reticulum, golgi, plasma membrane 28.6 27.16
HORVU1Hr1G051300.11 Barley endoplasmic reticulum, extracellular 24.79 23.64
Protein Annotations
Gene3D:1.10.630.10MapMan:11.1.3.2UniProt:A0A287UJD4InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872
GO:GO:0055114EnsemblPlantsGene:HORVU6Hr1G068690EnsemblPlants:HORVU6Hr1G068690.1InterPro:IPR036396PFAM:PF00067PRINTS:PR00385
PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24286PANTHER:PTHR24286:SF10SUPFAM:SSF48264SignalP:SignalP-noTM
UniParc:UPI000B46F6E7SEG:seg::::
Description
No Description!
Coordinates
chrchr6H:-:476332174..476334416
Molecular Weight (calculated)
52638.8 Da
IEP (calculated)
9.826
GRAVY (calculated)
-0.178
Length
472 amino acids
Sequence
(BLAST)
001: MGAFILLLCL LVPLVLVCAV RARKGAGGRS SSGGGKKGRL PPGSMGWPYV GETTQLYSSK NPNVFFARKR NKYGPIFKTH ILGCPCVMVS SPEAAKFVLV
101: TQAHLFKPTF PASKERMLGR QAIFFQQGDY HTHLRRLVSR AFSPEAIRGS VSSIEAIALR SLGSWEGHEV NTFQEMKTYA LNVALLSIFG EEEMQYIEEL
201: KQCYLTLEKG YNSMPVNLPG TLFHKAMKAR KRLGAIVAHI ISARRERERG SDLLGSFMDG REALTDDQIA DNAIGVIFAA RDTTASVLTW MVKFLGDNPA
301: VLKAVTEEHA EIAREKALSG EPLSWADTRR MRVTGRVIQE TMRVASILSF TFREAVEDVE YQGYLIPKGW KVLPLFRNIH HNPDHFPSPE KFDPSRFEVA
401: PKPNTFMPFG NGTHSCPGNE LAKLEMLVLC HHLATKYRWS TSKSESGVQF GPFALPINGL PMTFTQTHTS QW
Best Arabidopsis Sequence Match ( AT4G19230.1 )
(BLAST)
001: MDISALFLTL FAGSLFLYFL RCLISQRRFG SSKLPLPPGT MGWPYVGETF QLYSQDPNVF FQSKQKRYGS VFKTHVLGCP CVMISSPEAA KFVLVTKSHL
101: FKPTFPASKE RMLGKQAIFF HQGDYHAKLR KLVLRAFMPE SIRNMVPDIE SIAQDSLRSW EGTMINTYQE MKTYTFNVAL LSIFGKDEVL YREDLKRCYY
201: ILEKGYNSMP VNLPGTLFHK SMKARKELSQ ILARILSERR QNGSSHNDLL GSFMGDKEEL TDEQIADNII GVIFAARDTT ASVMSWILKY LAENPNVLEA
301: VTEEQMAIRK DKEEGESLTW GDTKKMPLTS RVIQETLRVA SILSFTFREA VEDVEYEGYL IPKGWKVLPL FRNIHHSADI FSNPGKFDPS RFEVAPKPNT
401: FMPFGNGTHS CPGNELAKLE MSIMIHHLTT KYSWSIVGAS DGIQYGPFAL PQNGLPIVLA RKPEIEV
Arabidopsis Description
CYP707A1Cytochrome P450, family 707, subfamily A, polypeptide 1 [Source:UniProtKB/TrEMBL;Acc:A8MRX5]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.