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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:plastid, secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G244900.1 Wheat endoplasmic reticulum 85.33 88.19
TraesCS5B01G236500.1 Wheat plastid 84.76 88.12
TraesCS5A01G238000.1 Wheat endoplasmic reticulum 84.57 86.89
Os09t0457100-01 Rice endoplasmic reticulum 73.52 77.2
Zm00001d020717_P001 Maize extracellular 71.62 75.35
EER99010 Sorghum endoplasmic reticulum, extracellular 71.24 74.5
GSMUA_Achr8P23280_001 Banana cytosol 21.9 71.88
Zm00001d005889_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 71.05 68.57
GSMUA_Achr9P15310_001 Banana golgi 61.33 66.94
GSMUA_Achr3P06970_001 Banana endoplasmic reticulum, golgi 60.0 66.32
VIT_03s0063g00380.t01 Wine grape cytosol 54.48 65.75
VIT_18s0001g10500.t01 Wine grape extracellular, golgi 57.9 64.68
CDY63039 Canola cytosol 16.76 62.41
Bra001741.1-P Field mustard cytosol 53.71 62.25
PGSC0003DMT400066337 Potato endoplasmic reticulum 56.57 62.13
GSMUA_Achr8P23290_001 Banana golgi, vacuole 37.9 61.42
KRH50278 Soybean endoplasmic reticulum, golgi 54.86 60.76
AT3G19270.2 Thale cress extracellular, golgi 54.1 60.68
CDX82303 Canola extracellular, golgi 54.86 60.63
KRH71139 Soybean endoplasmic reticulum, golgi 54.67 60.55
Solyc01g108210.2.1 Tomato endoplasmic reticulum, golgi 54.86 60.5
Bra022407.1-P Field mustard cytosol 52.19 60.49
KRH15360 Soybean endoplasmic reticulum 55.24 60.17
Solyc04g078900.2.1 Tomato endoplasmic reticulum, extracellular 53.14 58.61
CDX92318 Canola golgi 52.57 58.35
PGSC0003DMT400020589 Potato endoplasmic reticulum 52.57 58.11
KRH05684 Soybean endoplasmic reticulum, golgi, plasma membrane 55.62 57.03
VIT_07s0031g00690.t01 Wine grape cytosol 53.33 56.68
CDX99244 Canola golgi 52.95 56.39
KRH26021 Soybean cytosol, mitochondrion 21.9 53.99
HORVU6Hr1G068690.1 Barley golgi 47.81 53.18
HORVU0Hr1G016780.2 Barley golgi 47.81 53.18
HORVU5Hr1G009500.1 Barley golgi 28.38 30.6
HORVU2Hr1G046210.1 Barley endoplasmic reticulum 27.62 30.08
HORVU7Hr1G022480.1 Barley endoplasmic reticulum, golgi, plasma membrane 28.19 29.78
HORVU2Hr1G102260.2 Barley endoplasmic reticulum 27.62 29.71
HORVU2Hr1G011170.2 Barley golgi 27.62 29.65
HORVU5Hr1G118020.4 Barley endoplasmic reticulum 27.24 29.61
HORVU4Hr1G076010.2 Barley endoplasmic reticulum 25.9 28.27
HORVU2Hr1G064640.1 Barley endoplasmic reticulum, plasma membrane 25.71 27.16
HORVU1Hr1G051300.11 Barley endoplasmic reticulum, extracellular 24.57 26.06
Protein Annotations
Gene3D:1.10.630.10MapMan:11.1.3.2UniProt:A0A287RMP8InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506
GO:GO:0008150GO:GO:0008152GO:GO:0010295GO:GO:0016491GO:GO:0016705GO:GO:0020037
GO:GO:0046872GO:GO:0055114EnsemblPlantsGene:HORVU5Hr1G068330EnsemblPlants:HORVU5Hr1G068330.4InterPro:IPR036396PFAM:PF00067
PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24286PANTHER:PTHR24286:SF167SUPFAM:SSF48264
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000B488D20SEG:seg::
Description
No Description!
Coordinates
chrchr5H:-:517209743..517212889
Molecular Weight (calculated)
58854.3 Da
IEP (calculated)
9.801
GRAVY (calculated)
-0.135
Length
525 amino acids
Sequence
(BLAST)
001: MAFFLLLCIL VSVAIVSYAH HAIRRRRQGC AHGRHEQAAL KLPPGSMGLP YVGETLQLYS QDPSVFLSSK QKRYGEIFKT HLLGCPCVML ASPEAARFVL
101: VSRAHLFKPT YPRSKERLIG PSALFFHQGD YHLRLRRLVQ GPLGPEALRK LVPDIEAAVR STLAAWADGD VASTFHAMKR LSFDVGIVTI FGGRLDERRK
201: EELRRNYAVV EKGYNSFPNS FPGTLYYKAI QARRRLNGVL SDVVHERRER GEHGDDLLGC LMRSRAGGDD ADDEGALLTD EQVADNVIGV LFAAQDTTAS
301: VLTWIVKYLH DRPKLLEAVR AEHAAIHEAN DGGRRPLTWA QTRSMTLTHR VILESLRMAS IISFTFREAV ADVEYKGFLI PKGWKVMPLF RNIHHSPDYF
401: QDPHKFDPSR FKVAPRPNTF TPFGSGVHAC PGNELAKLEM LVLIHHLVTG YRCVPGSLST QILAVSPSLA VGTGNVPWLW LVQWRQFAGP PSQFHGTHAP
501: TMHPSCRTCS WVVLWNWLLP ALPRT
Best Arabidopsis Sequence Match ( AT3G19270.1 )
(BLAST)
001: MAEIWFLVVP ILILCLLLVR VIVSKKKKNS RGKLPPGSMG WPYLGETLQL YSQNPNVFFT SKQKRYGEIF KTRILGYPCV MLASPEAARF VLVTHAHMFK
101: PTYPRSKEKL IGPSALFFHQ GDYHSHIRKL VQSSFYPETI RKLIPDIEHI ALSSLQSWAN MPIVSTYQEM KKFAFDVGIL AIFGHLESSY KEILKHNYNI
201: VDKGYNSFPM SLPGTSYHKA LMARKQLKTI VSEIICERRE KRALQTDFLG HLLNFKNEKG RVLTQEQIAD NIIGVLFAAQ DTTASCLTWI LKYLHDDQKL
301: LEAVKAEQKA IYEENSREKK PLTWRQTRNM PLTHKVIVES LRMASIISFT FREAVVDVEY KGYLIPKGWK VMPLFRNIHH NPKYFSNPEV FDPSRFEVNP
401: KPNTFMPFGS GVHACPGNEL AKLQILIFLH HLVSNFRYVF HAR
Arabidopsis Description
CYP707A4CYP707A4 [Source:UniProtKB/TrEMBL;Acc:A0A178VA28]
SUBAcon: [golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.