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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 6
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid, secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
 plastid: 22736107
msms PMID: 22736107 doi
AH Kamal, K Cho, DE Kim, N Uozumi, KY Chung, SY Lee, JS Choi, SW Cho, CS Shin, SH Woo
Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk 361-763, Korea.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G244900.1 Wheat endoplasmic reticulum 98.42 97.83
TraesCS5A01G238000.1 Wheat endoplasmic reticulum 96.83 95.69
HORVU5Hr1G068330.4 Barley golgi 88.12 84.76
Os09t0457100-01 Rice endoplasmic reticulum 80.99 81.8
Zm00001d020717_P001 Maize extracellular 78.02 78.96
EER99010 Sorghum endoplasmic reticulum, extracellular 77.62 78.09
GSMUA_Achr8P23280_001 Banana cytosol 24.16 76.25
Zm00001d005889_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 76.44 70.96
CDY63039 Canola cytosol 19.6 70.21
VIT_03s0063g00380.t01 Wine grape cytosol 59.41 68.97
GSMUA_Achr9P15310_001 Banana golgi 64.95 68.19
GSMUA_Achr3P06970_001 Banana endoplasmic reticulum, golgi 63.17 67.16
VIT_18s0001g10500.t01 Wine grape extracellular, golgi 62.18 66.81
Bra001741.1-P Field mustard cytosol 58.02 64.68
PGSC0003DMT400066337 Potato endoplasmic reticulum 60.4 63.81
CDX82303 Canola extracellular, golgi 59.21 62.95
Bra022407.1-P Field mustard cytosol 56.44 62.91
AT3G19270.2 Thale cress extracellular, golgi 58.22 62.82
KRH50278 Soybean endoplasmic reticulum, golgi 58.61 62.45
KRH15360 Soybean endoplasmic reticulum 59.41 62.24
Solyc01g108210.2.1 Tomato endoplasmic reticulum, golgi 58.22 61.76
KRH71139 Soybean endoplasmic reticulum, golgi 57.82 61.6
PGSC0003DMT400020589 Potato endoplasmic reticulum 57.23 60.84
Solyc04g078900.2.1 Tomato endoplasmic reticulum, extracellular 57.23 60.71
CDX92318 Canola golgi 56.83 60.68
GSMUA_Achr8P23290_001 Banana golgi, vacuole 38.81 60.49
KRH05684 Soybean endoplasmic reticulum, golgi, plasma membrane 59.8 58.98
VIT_07s0031g00690.t01 Wine grape cytosol 57.43 58.7
CDX99244 Canola golgi 54.65 55.98
KRH26021 Soybean cytosol, mitochondrion 22.77 53.99
TraesCS6B01G298500.1 Wheat golgi 49.9 52.94
TraesCS5B01G038900.2 Wheat endoplasmic reticulum, plasma membrane 29.9 30.75
TraesCS6B01G419900.1 Wheat vacuole 29.11 30.43
TraesCS6B01G419600.1 Wheat endoplasmic reticulum 28.91 30.1
TraesCS2B01G076700.1 Wheat endoplasmic reticulum 28.91 30.1
TraesCS2B01G461700.1 Wheat endoplasmic reticulum 28.91 29.8
TraesCS4B01G382300.2 Wheat endoplasmic reticulum 28.71 29.77
TraesCS5B01G039200.1 Wheat golgi 29.9 29.67
TraesCS5B01G516300.1 Wheat endoplasmic reticulum 28.32 29.18
TraesCS2B01G088700.1 Wheat golgi, vacuole 28.51 28.8
TraesCS4B01G291700.2 Wheat endoplasmic reticulum, plasma membrane 26.53 27.02
TraesCS1B01G211700.1 Wheat endoplasmic reticulum, plasma membrane 26.34 26.71
TraesCS3B01G407200.1 Wheat endoplasmic reticulum, plasma membrane 26.53 26.38
Protein Annotations
Gene3D:1.10.630.10MapMan:11.1.3.2InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sf
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005506GO:GO:0008150GO:GO:0008152
GO:GO:0010295GO:GO:0016705GO:GO:0020037GO:GO:0055114InterPro:IPR036396PFAM:PF00067
PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24286PANTHER:PTHR24286:SF167SUPFAM:SSF48264
SignalP:SignalP-noTMTMHMM:TMhelixEnsemblPlantsGene:TraesCS5B01G236500EnsemblPlants:TraesCS5B01G236500.1SEG:seg:
Description
No Description!
Coordinates
chr5B:-:417549913..417552582
Molecular Weight (calculated)
56622.2 Da
IEP (calculated)
8.536
GRAVY (calculated)
-0.198
Length
505 amino acids
Sequence
(BLAST)
001: MAFFLLLLCI LISAAIVSYA HHVIRRQRQG CAHGRHEQAA LKLPLGSMGL PYIGETLQLY SQDPSVFLSS KQKRYGEIFK THLLGCPCVM LASPEAARFV
101: LVSRANLFKP TYPRSKERLI GPSALFFHQG DYHLRLRRLV QGPLGPEALR KLVPDIEAAV RATLAAWADG DVASTFHAMK RLSFDVGIVT IFGGRLDERR
201: KEELRRNYAV VEKGYNSFPN SFPGTLYYKA IQARRRLNGV LSDILHERRE RGEPGDDLLG CLMRSRAGGD DGDEGALLTD EQVADNVIGV LFAAQDTTAS
301: VLTWIVKYLH DRPKLLEAVR AEHAAIHEAN DGGRRPLTWA QTRSMTLTHR VILESLRMAS IISFTFREAV ADVEYKGFLI PKGWKVMPLF RNIHHSPDYF
401: QDPQKFDPSR FKVAPRPSTF TPFGSGVHAC PGNELAKLEM LVLIHHLVTG YRWEVVGSSD DVEYSPFPVP QNGLLARLRR DDSVCVGRKG CATDDNYDDE
501: DEVIV
Best Arabidopsis Sequence Match ( AT3G19270.2 )
(BLAST)
001: MAEIWFLVVP ILILCLLLVR VIVSKKKKNS RGKLPPGSMG WPYLGETLQL YSQNPNVFFT SKQKRYGEIF KTRILGYPCV MLASPEAARF VLVTHAHMFK
101: PTYPRSKEKL IGPSALFFHQ GDYHSHIRKL VQSSFYPETI RKLIPDIEHI ALSSLQSWAN MPIVSTYQEM KKFAFDVGIL AIFGHLESSY KEILKHNYNI
201: VDKGYNSFPM SLPGTSYHKA LMARKQLKTI VSEIICERRE KRALQTDFLG HLLNFKNEKG RVLTQEQIAD NIIGVLFAAQ DTTASCLTWI LKYLHDDQKL
301: LEAVKAEQKA IYEENSREKK PLTWRQTRNM PLTHKVIVES LRMASIISFT FREAVVDVEY KGYLIPKGWK VMPLFRNIHH NPKYFSNPEV FDPSRFEVNP
401: KPNTFMPFGS GVHACPGNEL AKLQILIFLH HLVSNFRWEV KGGEKGIQYS PFPIPQNGLP ATFRRHSL
Arabidopsis Description
CYP707A4CYP707A4 [Source:UniProtKB/TrEMBL;Acc:A0A178VA28]
SUBAcon: [golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.