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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 2
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
endoplasmic reticulum: 17205969
gfp PMID: 17205969 doi
H Saika, M Okamoto, K Miyoshi, T Kushiro, S Shinoda, Y Jikumaru, M Fujimoto, T Arikawa, H Takahashi, M Ando, S Arimura, A Miyao, H Hirochika, Y Kamiya, N Tsutsumi, E Nambara, M Nakazono
Laboratory of Plant Molecular Genetics, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER99010 Sorghum endoplasmic reticulum, extracellular 83.2 82.87
TraesCS5D01G244900.1 Wheat endoplasmic reticulum 82.4 81.1
TraesCS5B01G236500.1 Wheat plastid 81.8 80.99
Zm00001d020717_P001 Maize extracellular 79.8 79.96
TraesCS5A01G238000.1 Wheat endoplasmic reticulum 81.4 79.65
GSMUA_Achr8P23280_001 Banana cytosol 25.4 79.38
Zm00001d005889_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 80.2 73.71
HORVU5Hr1G068330.4 Barley golgi 77.2 73.52
Os08t0472800-01 Rice endoplasmic reticulum, golgi 74.0 72.55
GSMUA_Achr9P15310_001 Banana golgi 69.6 72.35
GSMUA_Achr3P06970_001 Banana endoplasmic reticulum, golgi 66.4 69.89
CDY63039 Canola cytosol 19.6 69.5
VIT_03s0063g00380.t01 Wine grape cytosol 60.4 69.43
VIT_18s0001g10500.t01 Wine grape extracellular, golgi 64.0 68.09
Bra001741.1-P Field mustard cytosol 59.2 65.34
PGSC0003DMT400066337 Potato endoplasmic reticulum 61.2 64.02
KRH50278 Soybean endoplasmic reticulum, golgi 60.6 63.92
Bra022407.1-P Field mustard cytosol 57.8 63.8
AT3G19270.2 Thale cress extracellular, golgi 59.4 63.46
GSMUA_Achr8P23290_001 Banana golgi, vacuole 41.0 63.27
CDX82303 Canola extracellular, golgi 60.0 63.16
Solyc01g108210.2.1 Tomato endoplasmic reticulum, golgi 59.8 62.82
KRH71139 Soybean endoplasmic reticulum, golgi 59.4 62.66
PGSC0003DMT400020589 Potato endoplasmic reticulum 59.4 62.53
KRH15360 Soybean endoplasmic reticulum 60.2 62.45
Solyc04g078900.2.1 Tomato endoplasmic reticulum, extracellular 59.2 62.18
CDX92318 Canola golgi 58.0 61.31
VIT_07s0031g00690.t01 Wine grape cytosol 60.2 60.93
KRH05684 Soybean endoplasmic reticulum, golgi, plasma membrane 61.2 59.77
CDX99244 Canola golgi 55.8 56.59
KRH26021 Soybean cytosol, mitochondrion 23.4 54.93
Os02t0703600-01 Rice golgi 45.2 53.55
Os07t0520300-01 Rice golgi, plastid 31.0 31.12
Os07t0518100-01 Rice golgi, plastid 30.2 30.69
Os07t0519600-00 Rice endoplasmic reticulum, golgi, vacuole 28.6 30.36
Os07t0519300-01 Rice peroxisome, plastid 26.6 29.56
Os07t0519100-01 Rice endoplasmic reticulum, golgi 27.4 28.6
Os10t0378000-00 Rice plastid 29.0 28.6
Os07t0518500-02 Rice plasma membrane 27.0 27.95
Os07t0520100-00 Rice mitochondrion 26.2 27.46
Os06t0110000-01 Rice plasma membrane 27.4 27.08
Os07t0517900-01 Rice endoplasmic reticulum, extracellular 19.6 26.2
Os05t0101600-01 Rice endoplasmic reticulum, plasma membrane 23.6 22.78
Os07t0491800-01 Rice cytosol, mitochondrion, nucleus 18.6 18.02
Os06t0110100-01 Rice cytosol 1.4 2.34
Os10t0378100-01 Rice endoplasmic reticulum, golgi 1.2 1.2
Os05t0101400-01 Rice plastid 0.2 0.73
Protein Annotations
Gene3D:1.10.630.10MapMan:11.1.3.2EntrezGene:4347261ProteinID:BAD38475.1ProteinID:BAF25280.1ProteinID:BAT08439.1
InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfProteinID:EAZ44986.1GO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0006629
GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009987
GO:GO:0010268GO:GO:0010295GO:GO:0016020GO:GO:0016021GO:GO:0016125GO:GO:0016132
GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046345GO:GO:0046872GO:GO:0055114
InterPro:IPR036396EnsemblPlantsGene:Os09g0457100EnsemblPlants:Os09t0457100-01PFAM:PF00067PRINTS:PR00385PRINTS:PR00463
ScanProsite:PS00086PANTHER:PTHR24286PANTHER:PTHR24286:SF167UniProt:Q0J185SUPFAM:SSF48264TMHMM:TMhelix
UniParc:UPI0000DD9762RefSeq:XP_015610835.1SEG:seg:::
Description
ABA-8'-HYDROXYLASE 3Cytochrome P450 family protein. (Os09t0457100-01)
Coordinates
chr9:-:17252034..17255420
Molecular Weight (calculated)
56169.8 Da
IEP (calculated)
9.295
GRAVY (calculated)
-0.165
Length
500 amino acids
Sequence
(BLAST)
001: MAASFVIVIV ISFFISLAFM CYVHYTSRQR RKLHGYGHEK AVRLPPGSMG WPYIGETLQL YSQDPNVFFA SKQKRYGEIF KTHILGCPCV MLASPEAARF
101: VLVTQAHLFK PTYPRSKERM IGPSALFFHQ GDYHLRLRKL VQGPLGPDAL RALVPDVEAA VRSTLASWDG NVSSTFHAMK RLSFDVGIVT IFGGRLDERR
201: KAELRQNYAI VEKGYNSFPN SFPGTLYYKA IQARRRLHGV LSDIMRERRA RGEPGSDLLG CLMQSRAGDD GALLTDEQVA DNIIGVLFAA QDTTASVLTW
301: IVKYLHDHPK LLEAVRAEQA AIRAANDGGR LPLTWAQTRS MALTHKVILE SLRMASIISF TFREAVADVE YKGFLIPKGW KVMPLFRNIH HNPDYFQDPQ
401: KFDPSRFKVS PRPNTFMPFG NGVHACPGNE LAKLEMLVLI HHLVTGYRWE IVGSSDEVEY SPFPVPKHGL LAKLWRDDSV SVETDGCQNG DNDDNGVAMV
Best Arabidopsis Sequence Match ( AT3G19270.2 )
(BLAST)
001: MAEIWFLVVP ILILCLLLVR VIVSKKKKNS RGKLPPGSMG WPYLGETLQL YSQNPNVFFT SKQKRYGEIF KTRILGYPCV MLASPEAARF VLVTHAHMFK
101: PTYPRSKEKL IGPSALFFHQ GDYHSHIRKL VQSSFYPETI RKLIPDIEHI ALSSLQSWAN MPIVSTYQEM KKFAFDVGIL AIFGHLESSY KEILKHNYNI
201: VDKGYNSFPM SLPGTSYHKA LMARKQLKTI VSEIICERRE KRALQTDFLG HLLNFKNEKG RVLTQEQIAD NIIGVLFAAQ DTTASCLTWI LKYLHDDQKL
301: LEAVKAEQKA IYEENSREKK PLTWRQTRNM PLTHKVIVES LRMASIISFT FREAVVDVEY KGYLIPKGWK VMPLFRNIHH NPKYFSNPEV FDPSRFEVNP
401: KPNTFMPFGS GVHACPGNEL AKLQILIFLH HLVSNFRWEV KGGEKGIQYS PFPIPQNGLP ATFRRHSL
Arabidopsis Description
CYP707A4CYP707A4 [Source:UniProtKB/TrEMBL;Acc:A0A178VA28]
SUBAcon: [golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.