Factsheet for TraesCS4A01G478100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G476500.1	Wheat	extracellular, plastid	53.31	80.79
TraesCS4A01G478300.1	Wheat	extracellular	47.84	77.57
TraesCS4A01G479900.1	Wheat	endoplasmic reticulum	75.79	65.1
TraesCS4A01G477700.1	Wheat	cytosol, plastid	78.39	62.67
TraesCS4A01G479100.1	Wheat	cytosol	77.52	52.75
TraesCS7A01G568200.1	Wheat	endoplasmic reticulum	61.38	47.02
TraesCS4A01G477300.1	Wheat	cytosol	81.56	45.87
TraesCS4A01G476200.1	Wheat	cytosol	77.23	34.36
TraesCS4A01G476400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	78.1	30.87
TraesCS1A01G379100.1	Wheat	endoplasmic reticulum	62.54	26.79
TraesCS4A01G478800.1	Wheat	cytosol, mitochondrion, nucleus, plastid	53.03	26.47
TraesCS2A01G544200.1	Wheat	golgi	29.97	26.13
TraesCS4A01G480200.1	Wheat	endoplasmic reticulum	79.83	25.96
TraesCS4A01G477800.1	Wheat	plasma membrane	81.27	22.54
TraesCS4A01G479400.1	Wheat	cytosol, plasma membrane	82.71	22.53
TraesCS3A01G316800.1	Wheat	endoplasmic reticulum, extracellular	64.55	22.42
TraesCS7A01G016300.1	Wheat	cytosol	81.84	21.98
TraesCS4A01G480100.1	Wheat	plasma membrane	79.25	21.4
TraesCS4A01G476700.1	Wheat	extracellular, plasma membrane	77.81	21.23
TraesCS4A01G478600.1	Wheat	cytosol	76.66	21.11
TraesCS4A01G478900.1	Wheat	plasma membrane, plastid	78.96	21.03
TraesCS7A01G513100.1	Wheat	cytosol	27.95	21.0
TraesCS4A01G475400.1	Wheat	endoplasmic reticulum, golgi	83.0	20.91
HORVU0Hr1G030390.1	Barley	plasma membrane	77.52	20.79
HORVU0Hr1G027280.1	Barley	plasma membrane	77.52	20.79
TraesCS4A01G476100.1	Wheat	extracellular, plasma membrane	76.95	20.73
TraesCS4A01G479700.1	Wheat	cytosol	68.88	19.06
TraesCS4A01G478200.1	Wheat	cytosol	24.5	15.95
HORVU7Hr1G001510.1	Barley	mitochondrion	51.87	15.29
TraesCS5A01G296500.1	Wheat	cytosol	22.19	14.23
TraesCS4A01G475900.1	Wheat	cytosol, mitochondrion	24.5	13.54
TraesCS5A01G296600.1	Wheat	cytosol	31.12	11.0
TraesCS4A01G466500.1	Wheat	cytosol, extracellular	27.95	10.21
TraesCS4A01G478400.1	Wheat	cytosol	27.95	9.11
TraesCS7A01G513000.1	Wheat	cytosol	20.17	8.73
TraesCS4A01G476600.1	Wheat	cytosol	24.5	8.47
TraesCS2A01G579900.2	Wheat	cytosol	20.46	8.46
TraesCS1A01G006700.1	Wheat	cytosol	20.46	7.55
TraesCS5A01G446900.1	Wheat	cytosol	12.68	6.15
TraesCS7A01G041700.1	Wheat	cytosol	6.63	4.0
TraesCS3A01G316900.1	Wheat	cytosol	6.63	3.25
TraesCS4A01G476300.1	Wheat	cytosol	0.86	0.75
TraesCS4A01G480300.1	Wheat	cytosol	0.86	0.48
TraesCS4A01G475700.1	Wheat	cytosol	0.86	0.35
TraesCS4A01G480000.1	Wheat	cytosol	0.86	0.35
TraesCS7A01G568300.1	Wheat	cytosol	0.0	0.0
TraesCS4A01G477600.1	Wheat	extracellular, plasma membrane	0.0	0.0
TraesCS1A01G003000.1	Wheat	cytosol	0.0	0.0
TraesCS2A01G544300.1	Wheat	cytosol	0.0	0.0
TraesCS4A01G478000.1	Wheat	cytosol	0.0	0.0
TraesCS4A01G477400.1	Wheat	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS4A01G478100.1	EnsemblPlantsGene:TraesCS4A01G478100	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	ncoils:Coil	PANTHER:PTHR23155	PANTHER:PTHR23155:SF876
PFAM:PF00931	PRINTS:PR00364	SEG:seg	SUPFAM:SSF52540	MapMan:35.1	:

Description

No Description!

Coordinates

chr4A:-:735561660..735562703

Molecular Weight (calculated)

38547.5 Da

IEP (calculated)

8.581

GRAVY (calculated)

-0.239

Length

347 amino acids

Sequence
(BLAST)

001: MEVMLASTAL SVSLKFAASP ALKKLLANAS TYLGVDMVHE LHELESTILP QFELLIEAAD KGNHRPKLDK WLQELKEGFY MAEDLLDEHE YNLLKRQAKG
101: KDSLPASASS INNTFMKPLH AASSRLANLS SKNRTLIRHL KELKATLVKA KDFHQLLCLP AGSGYNAESP AIPSAAFPET TSIPPLKVIG RDKERDRIID
201: QLTKTTATTE CSTSMYSGLA IVGAGGMGKS TLAPHVYNDK RVKEYFDVTM WVSISRKLDV RRHTRAIIES TSQGECPRID NLDTLQRKLT DILQKSGKFL
301: LVLDDVWFEP GSEREWNQLL APLVSQQTGS KVLVTFSTQY ISSCSLL

Best Arabidopsis Sequence Match ( AT3G14470.1 )
(BLAST)

0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD

Arabidopsis Description

RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.