Factsheet for TraesCS4A01G479900.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G478100.1	Wheat	cytosol	65.1	75.79
TraesCS4A01G476500.1	Wheat	extracellular, plastid	42.08	74.24
TraesCS4A01G478300.1	Wheat	extracellular	38.12	71.96
TraesCS4A01G477700.1	Wheat	cytosol, plastid	77.23	71.89
TraesCS4A01G479100.1	Wheat	cytosol	77.23	61.18
TraesCS7A01G568200.1	Wheat	endoplasmic reticulum	61.39	54.75
TraesCS4A01G477300.1	Wheat	cytosol	80.45	52.67
TraesCS4A01G476200.1	Wheat	cytosol	78.96	40.9
TraesCS4A01G476400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	80.2	36.9
TraesCS4A01G478800.1	Wheat	cytosol, mitochondrion, nucleus, plastid	60.89	35.4
TraesCS7D01G013100.1	Wheat	extracellular, plasma membrane	94.06	34.83
TraesCS4A01G480200.1	Wheat	endoplasmic reticulum	84.16	31.86
TraesCS1A01G379100.1	Wheat	endoplasmic reticulum	63.61	31.73
TraesCS4A01G476100.1	Wheat	extracellular, plasma membrane	99.5	31.21
TraesCS2A01G544200.1	Wheat	golgi	28.96	29.4
TraesCS3A01G316800.1	Wheat	endoplasmic reticulum, extracellular	66.83	27.03
TraesCS7A01G513100.1	Wheat	cytosol	30.45	26.62
TraesCS4A01G476700.1	Wheat	extracellular, plasma membrane	80.45	25.55
TraesCS4A01G479400.1	Wheat	cytosol, plasma membrane	79.7	25.27
TraesCS4A01G477800.1	Wheat	plasma membrane	77.97	25.18
TraesCS4A01G478600.1	Wheat	cytosol	78.22	25.08
TraesCS7A01G016300.1	Wheat	cytosol	79.7	24.92
TraesCS4A01G478200.1	Wheat	cytosol	32.18	24.39
TraesCS4A01G478900.1	Wheat	plasma membrane, plastid	78.22	24.25
TraesCS4A01G480100.1	Wheat	plasma membrane	76.98	24.2
TraesCS4A01G475400.1	Wheat	endoplasmic reticulum, golgi	78.47	23.02
TraesCS4A01G479700.1	Wheat	cytosol	71.29	22.97
TraesCS4A01G475900.1	Wheat	cytosol, mitochondrion	32.67	21.02
TraesCS5A01G296500.1	Wheat	cytosol	27.48	20.52
TraesCS5A01G296600.1	Wheat	cytosol	33.91	13.95
TraesCS4A01G478400.1	Wheat	cytosol	36.14	13.71
TraesCS4A01G476600.1	Wheat	cytosol	32.67	13.15
TraesCS7A01G513000.1	Wheat	cytosol	24.01	12.09
TraesCS4A01G466500.1	Wheat	cytosol, extracellular	28.22	12.0
TraesCS2A01G579900.2	Wheat	cytosol	23.02	11.08
TraesCS5A01G446900.1	Wheat	cytosol	18.32	10.35
TraesCS1A01G006700.1	Wheat	cytosol	23.27	9.99
TraesCS3A01G316900.1	Wheat	cytosol	16.34	9.34
TraesCS7A01G041700.1	Wheat	cytosol	11.14	7.83
TraesCS4A01G476300.1	Wheat	cytosol	0.74	0.75
TraesCS4A01G480300.1	Wheat	cytosol	0.99	0.65
TraesCS1A01G003000.1	Wheat	cytosol	0.5	0.46
TraesCS4A01G480000.1	Wheat	cytosol	0.74	0.35
TraesCS4A01G475700.1	Wheat	cytosol	0.5	0.23
TraesCS7A01G568300.1	Wheat	cytosol	0.25	0.13
TraesCS4A01G478000.1	Wheat	cytosol	0.0	0.0
TraesCS4A01G477600.1	Wheat	extracellular, plasma membrane	0.0	0.0
TraesCS4A01G477400.1	Wheat	cytosol	0.0	0.0
TraesCS2A01G544300.1	Wheat	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS4A01G479900.1	EnsemblPlantsGene:TraesCS4A01G479900	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	ncoils:Coil	PANTHER:PTHR23155	PANTHER:PTHR23155:SF876
PFAM:PF00931	PRINTS:PR00364	SEG:seg	SUPFAM:SSF52540	MapMan:35.1	:

Description

No Description!

Coordinates

chr4A:+:736570750..736571964

Molecular Weight (calculated)

45078.6 Da

IEP (calculated)

6.608

GRAVY (calculated)

-0.187

Length

404 amino acids

Sequence
(BLAST)

001: MTEVALAIAG LRLAASPVLK KLLAYSSTYL GVDMALELHE LEATIMPQFE LLIEAADKGK HRPKLDKWLE ELKEAFYLAE ELLEEHEYNR LKRQAKGKDS
101: LPPNASTIGS TFMKPLRAAS SRLSNLSSEN RKLLRQLHEL KATLAKAKEF RELLCLPAIY NAESPTIPPV DVLEATSLQP MKVIGRDKDC DHIIDRLTKT
201: TATTESESST AMYSGLAIVG VGGMGKSTLA QLVYNDKRVK EYFDVTMWVS ISRKLDVRRH TREIIESASQ GECPHIGSLD TLQHKLANIL QESGKFLLVL
301: DDVWFEPGSE GEWDQLLAPL VSQQMGSKIL VTSRRNTFPA ALCCEVCPLE NMEDAQFLAL FKHYAFSGPK IIDLQLRERL EDFAEKVAKR LGQSPLAAKV
401: VVPS

Best Arabidopsis Sequence Match ( AT3G14470.1 )
(BLAST)

0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD

Arabidopsis Description

RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.