Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G156400.3 | Wheat | golgi | 18.25 | 6.41 |
| TraesCS4A01G028500.1 | Wheat | plastid | 4.75 | 6.07 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G277500.1 | EnsemblPlantsGene:TraesCS4B01G277500 | Gene3D:2.130.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001680 | InterPro:IPR015943 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom_sf | PANTHER:PTHR13923 |
| PANTHER:PTHR13923:SF11 | PFAM:PF00400 | SMART:SM00320 | SUPFAM:SSF50978 | MapMan:22.4.1.2 | : |
Description
No Description!
Coordinates
chr4B:-:559262164..559264756
Molecular Weight (calculated)
43981.3 Da
IEP (calculated)
6.584
GRAVY (calculated)
-0.295
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAQGRGDAG RRTSRVDVLQ LLRPSGEHPL AYPLQVDCLV GAPGLRRLAW SAPPTGYEPG FTFADQELYQ AGLLAGGFDD GTVRIWNPEP ALLWDLNQGV
101: AEKPKPVLKM DDNPALALVY EKDLPQTVSG MNDTIGKIEW ASRNTKWKKT GSNVRDTNAE WYICPKEVHY QVTNEMDLLT ESHDLEGPVL GLSFSDIKPH
201: LIATGASDET ITIHDLSYPI KLSNLTLELK DAGSSEVETE ITSLKWNKIY PCILASTTNK GSTKFWDIRA KKSLKTCKAG KVKMCSDLEF SLRNPMHAAV
301: STVDNGASAA VTIWDMRKLI VPYYQYNVGA PGVISLSWNH LGQLLASHVD GSISCYDVYD RKMVEGGSSY AHADLGVTWT HSENVVAALS SKKGVRLYQH
101: AEKPKPVLKM DDNPALALVY EKDLPQTVSG MNDTIGKIEW ASRNTKWKKT GSNVRDTNAE WYICPKEVHY QVTNEMDLLT ESHDLEGPVL GLSFSDIKPH
201: LIATGASDET ITIHDLSYPI KLSNLTLELK DAGSSEVETE ITSLKWNKIY PCILASTTNK GSTKFWDIRA KKSLKTCKAG KVKMCSDLEF SLRNPMHAAV
301: STVDNGASAA VTIWDMRKLI VPYYQYNVGA PGVISLSWNH LGQLLASHVD GSISCYDVYD RKMVEGGSSY AHADLGVTWT HSENVVAALS SKKGVRLYQH
0001: MACIKGVGRS ASVALAPDAP YMAAGTMAGA VDLSFSSSAN LEIFKLDFQS DDRDLPLVGE IPSSERFNRL AWGRNGSGSE EFALGLIAGG LVDGNIDLWN
0101: PLSLIGSQPS ENALVGHLSV HKGPVRGLEF NAISSNLLAS GADDGEICIW DLLKPSEPSH FPLLKGSGSA TQGEISFISW NRKVQQILAS TSYNGTTVIW
0201: DLRKQKPIIN FADSVRRRCS VLQWNPNVTT QIMVASDDDS SPTLKLWDMR NIMSPVREFT GHQRGVIAME WCPSDSSYLL TCAKDNRTIC WDTNTAEIVA
0301: ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGVEENNFG TAPLKAPKWY KRPVGASFGF GGKLVSCHAR APAKGTSSIL SESLVSRTSE
0401: FEAAIENGDM TSLRGLCEKK SEETESEEEK ETWGLLKIMF EEEGTSRTKL ISHLGFTLPV AEKDQAVDGL SSDLNGIRLE DTAADALDLD DSNEAAAFAM
0501: DNGEDFFNNF PAKPDTPVST SAKDFMPSDT DFSTKGEETQ EMQEEEEESS DPVFDNAIQR ALIVGDYKEA VDQCITANKM ADALVIAHVG GTALWESTRE
0601: KYLKTSSAPY MKVVSAMVNN DLRSLIYTRS HKFWKETLAL LCTFAQGEQW TTLCDALASK LMAAGNTLAA VLCYICAGNV DRTVEIWSRS LANERDGRSY
0701: AELLQDLMEK TLVLALATGN KKFSASLCKL FESYAEILAS QGLLTTAMKY LKVLDSGGLS PELSILRDRI SLSAEPETNT TASGNTQPQS TMPYNQEPTQ
0801: AQPNVLANPY DNQYQQPYTD SYYVPQVSHP PMQQPTMFMP HQAQPAPQPS FTPAPTSNAQ PSMRTTFVPS TPPALKNADQ YQQPTMSSHS FTGPSNNAYP
0901: VPPGPGQYAP SGPSQLGQYP NPKMPQVVAP AAGPIGFTPM ATPGVAPRSV QPASPPTQQA AAQAAPAPAT PPPTVQTADT SNVPAHQKPV IATLTRLFNE
1001: TSEALGGARA NTTKKREIED NSRKLGALFV KLNSGDISKN AADKLAQLCQ ALDNNDFSTA LQIQVLLTTS EWDECNFWLA TLKRMMVKAR QNVR
0101: PLSLIGSQPS ENALVGHLSV HKGPVRGLEF NAISSNLLAS GADDGEICIW DLLKPSEPSH FPLLKGSGSA TQGEISFISW NRKVQQILAS TSYNGTTVIW
0201: DLRKQKPIIN FADSVRRRCS VLQWNPNVTT QIMVASDDDS SPTLKLWDMR NIMSPVREFT GHQRGVIAME WCPSDSSYLL TCAKDNRTIC WDTNTAEIVA
0301: ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGVEENNFG TAPLKAPKWY KRPVGASFGF GGKLVSCHAR APAKGTSSIL SESLVSRTSE
0401: FEAAIENGDM TSLRGLCEKK SEETESEEEK ETWGLLKIMF EEEGTSRTKL ISHLGFTLPV AEKDQAVDGL SSDLNGIRLE DTAADALDLD DSNEAAAFAM
0501: DNGEDFFNNF PAKPDTPVST SAKDFMPSDT DFSTKGEETQ EMQEEEEESS DPVFDNAIQR ALIVGDYKEA VDQCITANKM ADALVIAHVG GTALWESTRE
0601: KYLKTSSAPY MKVVSAMVNN DLRSLIYTRS HKFWKETLAL LCTFAQGEQW TTLCDALASK LMAAGNTLAA VLCYICAGNV DRTVEIWSRS LANERDGRSY
0701: AELLQDLMEK TLVLALATGN KKFSASLCKL FESYAEILAS QGLLTTAMKY LKVLDSGGLS PELSILRDRI SLSAEPETNT TASGNTQPQS TMPYNQEPTQ
0801: AQPNVLANPY DNQYQQPYTD SYYVPQVSHP PMQQPTMFMP HQAQPAPQPS FTPAPTSNAQ PSMRTTFVPS TPPALKNADQ YQQPTMSSHS FTGPSNNAYP
0901: VPPGPGQYAP SGPSQLGQYP NPKMPQVVAP AAGPIGFTPM ATPGVAPRSV QPASPPTQQA AAQAAPAPAT PPPTVQTADT SNVPAHQKPV IATLTRLFNE
1001: TSEALGGARA NTTKKREIED NSRKLGALFV KLNSGDISKN AADKLAQLCQ ALDNNDFSTA LQIQVLLTTS EWDECNFWLA TLKRMMVKAR QNVR
Arabidopsis Description
SEC31BProtein transport protein SEC31 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q8L611]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.