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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 1
  • cytosol 1
  • mitochondrion 1
  • peroxisome 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, peroxisome
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:peroxisome
YLoc:peroxisome
 plastid: 22160430
plastid: 22736107
plastid: 26362323
plastid: 28542341
msms PMID: 22736107 doi
AH Kamal, K Cho, DE Kim, N Uozumi, KY Chung, SY Lee, JS Choi, SW Cho, CS Shin, SH Woo
Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk 361-763, Korea.
msms PMID: 22160430 doi
AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo
Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.
msms PMID: 28542341 doi
K Shi, J Gu, H Guo, L Zhao, Y Xie, H Xiong, J Li, S Zhao, X Song, L Liu
National Key Facility for Crop Gene Resources and Genetic Improvement, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China., School of Life Sciences, Qingdao Agricultural University, Qingdao, Shandong, China.
msms PMID: 26362323 doi
X Li, C Hao, J Zhong, F Liu, J Cai, X Wang, Q Zhou, T Dai, W Cao, D Jiang
Faculty of Science, Department of Plant and Environmental Sciences, University of Copenhagen, Højbakkegaard Allé 13, DK-2630, Taastrup, Denmark. fl@plen.ku.dk., Faculty of Science, Department of Plant and Environmental Sciences, University of Copenhagen, Højbakkegaard Allé 13, DK-2630, Taastrup, Denmark. xili@plen.ku.dk., National Engineering and Technology Center for Information Agriculture / Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China. 429382882@qq.com., National Engineering and Technology Center for Information Agriculture / Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China. caijian@njau.edu.cn., National Engineering and Technology Center for Information Agriculture / Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China. caow@njau.edu.cn., National Engineering and Technology Center for Information Agriculture / Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China. jiangd@njau.edu.cn., National Engineering and Technology Center for Information Agriculture / Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China. kayozhong@163.com., National Engineering and Technology Center for Information Agriculture / Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China. qinzhou@njau.edu.cn., National Engineering and Technology Center for Information Agriculture / Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China. tingbod@njau.edu.cn., National Engineering and Technology Center for Information Agriculture / Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China. xiaowang@njau.edu.cn., National Engineering and Technology Center for Information Agriculture / Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China. xili@plen.ku.dk.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G322700.1 Wheat plastid 99.39 99.39
TraesCS5A01G498000.1 Wheat plastid 98.98 98.98
Os03t0131200-01 Rice peroxisome 91.67 91.67
KXG40256 Sorghum peroxisome 88.82 88.82
HORVU4Hr1G082040.3 Barley mitochondrion 96.54 87.48
Zm00001d027511_P001 Maize peroxisome 86.59 86.41
TraesCS7B01G473400.1 Wheat peroxisome 81.71 81.71
TraesCS6B01G056800.2 Wheat cytosol 71.75 71.46
Protein Annotations
KEGG:00380+1.11.1.6KEGG:00630+1.11.1.6MapMan:10.2.1Gene3D:2.40.180.10InterPro:CatalaseInterPro:Catalase_AS
InterPro:Catalase_clade1/3InterPro:Catalase_coreInterPro:Catalase_core_sfInterPro:Catalase_haem_BSInterPro:Catalase_immune_responsiveInterPro:Catalase_sf
GO:GO:0003674GO:GO:0003824GO:GO:0004096GO:GO:0005488GO:GO:0006950GO:GO:0006979
GO:GO:0008150GO:GO:0008152GO:GO:0020037GO:GO:0055114InterPro:IPR018028InterPro:IPR037060
PFAM:PF00199PFAM:PF06628PIRSF:PIRSF038928PRINTS:PR00067ScanProsite:PS00437ScanProsite:PS00438
PFscan:PS51402PANTHER:PTHR11465PANTHER:PTHR11465:SF24SMART:SM01060SUPFAM:SSF56634EnsemblPlantsGene:TraesCS4B01G325800
EnsemblPlants:TraesCS4B01G325800.1TIGR:cd08154::::
Description
No Description!
Coordinates
chr4B:-:616987369..616990899
Molecular Weight (calculated)
56796.9 Da
IEP (calculated)
7.019
GRAVY (calculated)
-0.595
Length
492 amino acids
Sequence
(BLAST)
001: MDPYKYRPSS SFNAPMWSTN SGAPVWNNDN SLTVGSRGPI LLEDYHLVEK IADFDRERIP ERVVHARGAS AKGFFEVTHD VSHLTCADFL RAPGVQTPVI
101: VRFSTVIHER GSPETLRDPR GFAIKFYTRE GNWDLVGNNF PVFFIRDGMK FPDMVHALKP NPKTHIQENW RILDFFSHHP ESLHMFTFLF DDIGVPADYR
201: HMDGSGVNTY TLVNRAGKAH YVKFHWKPTC GVKSLLEEEA VTVGGTNHSH ATKDLTDSIA AGNYPEWTFY IQTIDPDYEE RFDFDPLDVT KTWPEDVVPL
301: QPVGRLVLNR NIDNFFSENE QLAFCPGIIV PGVYYSDDKL LQTRIFSYSD TQRHRLGPNY LLLPANAPKC SHHNNHYDGL MNFMHRDEEV DYFPSRFDPA
401: KHAPRYPIPS RTLNGRREKM VIEKENNFKQ PGERYRSMDP ARQERFINRW IDALSDPRLT HEIKAIWLSY WSQADKSLGQ KLASRLSSKP SM
Best Arabidopsis Sequence Match ( AT4G35090.1 )
(BLAST)
001: MDPYKYRPAS SYNSPFFTTN SGAPVWNNNS SMTVGPRGPI LLEDYHLVEK LANFDRERIP ERVVHARGAS AKGFFEVTHD ISNLTCADFL RAPGVQTPVI
101: VRFSTVIHER GSPETLRDPR GFAVKFYTRE GNFDLVGNNF PVFFIRDGMK FPDMVHALKP NPKSHIQENW RILDFFSHHP ESLNMFTFLF DDIGIPQDYR
201: HMDGSGVNTY MLINKAGKAH YVKFHWKPTC GVKSLLEEDA IRVGGTNHSH ATQDLYDSIA AGNYPEWKLF IQIIDPADED KFDFDPLDVT KTWPEDILPL
301: QPVGRMVLNK NIDNFFAENE QLAFCPAIIV PGIHYSDDKL LQTRVFSYAD TQRHRLGPNY LQLPVNAPKC AHHNNHHEGF MNFMHRDEEV NYFPSRYDQV
401: RHAEKYPTPP AVCSGKRERC IIEKENNFKE PGERYRTFTP ERQERFIQRW IDALSDPRIT HEIRSIWISY WSQADKSLGQ KLASRLNVRP SI
Arabidopsis Description
CAT2catalase 2 [Source:TAIR;Acc:AT4G35090]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.