Factsheet for TraesCS5A01G498000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	peroxisome

plastid: 22160430

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G322700.1	Wheat	plastid	99.19	99.19
TraesCS4B01G325800.1	Wheat	plastid	98.98	98.98
Os03t0131200-01	Rice	peroxisome	91.67	91.67
KXG40256	Sorghum	peroxisome	89.84	89.84
HORVU4Hr1G082040.3	Barley	mitochondrion	96.95	87.85
Zm00001d027511_P001	Maize	peroxisome	87.4	87.22
TraesCS7A01G549800.1	Wheat	golgi, plastid, unclear	82.32	82.32
TraesCS7A01G549900.1	Wheat	cytosol	46.14	78.28
TraesCS6A01G041700.1	Wheat	unclear	72.36	72.06

Protein Annotations

KEGG:00380+1.11.1.6	KEGG:00630+1.11.1.6	MapMan:10.2.1	Gene3D:2.40.180.10	InterPro:Catalase	InterPro:Catalase_AS
InterPro:Catalase_clade1/3	InterPro:Catalase_core	InterPro:Catalase_core_sf	InterPro:Catalase_haem_BS	InterPro:Catalase_immune_responsive	InterPro:Catalase_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004096	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979
GO:GO:0008150	GO:GO:0008152	GO:GO:0020037	GO:GO:0055114	InterPro:IPR018028	InterPro:IPR037060
PFAM:PF00199	PFAM:PF06628	PIRSF:PIRSF038928	PRINTS:PR00067	ScanProsite:PS00437	ScanProsite:PS00438
PFscan:PS51402	PANTHER:PTHR11465	PANTHER:PTHR11465:SF24	SMART:SM01060	SUPFAM:SSF56634	EnsemblPlantsGene:TraesCS5A01G498000
EnsemblPlants:TraesCS5A01G498000.1	TIGR:cd08154	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:665466367..665470312

Molecular Weight (calculated)

56696.7 Da

IEP (calculated)

7.043

GRAVY (calculated)

-0.599

Length

492 amino acids

Sequence
(BLAST)

001: MDPYKYRPSS SFNAPMWSTN SGAPVWNNDN SLTVGSRGPI LLEDYHLVEK IADFDRERIP ERVVHARGAS AKGFFEVTHD VSHLTCADFL RAPGVQTPVI
101: VRFSTVIHER GSPETLRDPR GFAIKFYTRE GNWDLVGNNF PVFFIRDGMK FPDMVHALKP NPKTHIQENW RILDFFSHHP ESLHMFTFLF DDVGVPADYR
201: HMDGSGVNTY TLVNRAGKAH YVKFHWKPTC GVKSLLEDEA VTVGGTNHSH ATKDLTDSIA AGNYPEWTFY IQTIDPDHEE RFDFDPLDVT KTWPEDVVPL
301: QPVGRLVLNR NIDNFFAENE QLAFCPGIIV PGVYYSDDKL LQTRIFSYSD TQRHRLGPNY LLLPANAPKC SHHNNHYDGL MNFMHRDEEV DYFPSRFDPA
401: KHAPRYPIPS RTLNGRREKT VIEKENNFKQ PGERYRSMDP ARQERFINRW IDALSDPRLT HEIKAIWLSY WSQADKSLGQ KLASRLSSKP SM

Best Arabidopsis Sequence Match ( AT4G35090.1 )
(BLAST)

001: MDPYKYRPAS SYNSPFFTTN SGAPVWNNNS SMTVGPRGPI LLEDYHLVEK LANFDRERIP ERVVHARGAS AKGFFEVTHD ISNLTCADFL RAPGVQTPVI
101: VRFSTVIHER GSPETLRDPR GFAVKFYTRE GNFDLVGNNF PVFFIRDGMK FPDMVHALKP NPKSHIQENW RILDFFSHHP ESLNMFTFLF DDIGIPQDYR
201: HMDGSGVNTY MLINKAGKAH YVKFHWKPTC GVKSLLEEDA IRVGGTNHSH ATQDLYDSIA AGNYPEWKLF IQIIDPADED KFDFDPLDVT KTWPEDILPL
301: QPVGRMVLNK NIDNFFAENE QLAFCPAIIV PGIHYSDDKL LQTRVFSYAD TQRHRLGPNY LQLPVNAPKC AHHNNHHEGF MNFMHRDEEV NYFPSRYDQV
401: RHAEKYPTPP AVCSGKRERC IIEKENNFKE PGERYRTFTP ERQERFIQRW IDALSDPRIT HEIRSIWISY WSQADKSLGQ KLASRLNVRP SI

Arabidopsis Description

CAT2catalase 2 [Source:TAIR;Acc:AT4G35090]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.