Factsheet for TraesCS7A01G549800.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, unclear, plastid

Predictor Summary:

cytosol 1
mitochondrion 1
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plastid, unclear
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	peroxisome

plastid: 22736107
golgi: 25769308
unclear: 25769308

msms PMID: 22736107 doi

AH Kamal, K Cho, DE Kim, N Uozumi, KY Chung, SY Lee, JS Choi, SW Cho, CS Shin, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk 361-763, Korea.

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G105300.1	Wheat	golgi, mitochondrion, plastid	98.78	98.78
TraesCS7B01G473400.1	Wheat	peroxisome	98.37	98.37
TraesCS7A01G549900.1	Wheat	cytosol	56.1	95.17
Zm00001d014848_P001	Maize	plasma membrane	92.07	92.07
EER88998	Sorghum	peroxisome	91.67	91.67
Os06t0727200-02	Rice	peroxisome	91.46	91.46
HORVU7Hr1G121700.1	Barley	cytosol	97.36	82.44
TraesCS5A01G498000.1	Wheat	plastid	82.32	82.32
TraesCS6A01G041700.1	Wheat	unclear	70.73	70.45
Solyc01g099420.1.1	Tomato	cytosol	11.18	57.89
CDY43951	Canola	plastid	15.04	33.95
CDY31866	Canola	extracellular, nucleus, peroxisome, plastid	13.62	33.33
GSMUA_Achr5P19120_001	Banana	cytosol, peroxisome, plastid	8.54	31.11

Protein Annotations

KEGG:00380+1.11.1.6	KEGG:00630+1.11.1.6	MapMan:10.2.1	Gene3D:2.40.180.10	InterPro:Catalase	InterPro:Catalase_AS
InterPro:Catalase_clade1/3	InterPro:Catalase_core	InterPro:Catalase_core_sf	InterPro:Catalase_haem_BS	InterPro:Catalase_immune_responsive	InterPro:Catalase_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004096	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979
GO:GO:0008150	GO:GO:0008152	GO:GO:0020037	GO:GO:0055114	InterPro:IPR018028	InterPro:IPR037060
PFAM:PF00199	PFAM:PF06628	PIRSF:PIRSF038928	PRINTS:PR00067	ScanProsite:PS00437	ScanProsite:PS00438
PFscan:PS51402	PANTHER:PTHR11465	PANTHER:PTHR11465:SF34	SMART:SM01060	SUPFAM:SSF56634	EnsemblPlantsGene:TraesCS7A01G549800
EnsemblPlants:TraesCS7A01G549800.1	TIGR:cd08154	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:724082618..724086126

Molecular Weight (calculated)

56420.9 Da

IEP (calculated)

7.263

GRAVY (calculated)

-0.501

Length

492 amino acids

Sequence
(BLAST)

001: MDPYKHRPTS GANSGYWTTN SGAPVWNNNN ALTVGQRGPI LLEDYHLIEK LAQFDRERIP ERVVHARGAS AKGFFEVTHD VSQLTCADFL RAPGVQTPVI
101: VRFSTVVHER GSPETLRDPR GFAVKFYTRE GNFDLVGNNM PVFFIRDGMK FPDMVHAFKP SPKTNMQENW RIVDFFSHHP ESLHMFTFLF DDVGIPLNYR
201: HMDGFGVNTY TLISRDGKAH LVKFHWKPTC GVKCLLDDEA VTVGGTCHTH ATKDLTDAIA AGNYPEWKLF IQTIDADHED KFDFDPLDVT KTWPEDIIPL
301: QPVGRMVLNK NIDNFFAENE QLAFCPAVTV PGIHYSDDKL LQTRIFSYAD TQRHRLGPNY LMLPVNAPKC AHHNNHHDGL MNFMHRDEEV NYFPSRFDPT
401: RHAEQYPVPP RVLSGCREKC IIEKENNFKQ AGERYRSFGP ARQDRFLQRW VDALTDARVT HEIQGIWVSY WSQCDASLGK KLASRLKIKP SM

Best Arabidopsis Sequence Match ( AT4G35090.1 )
(BLAST)

001: MDPYKYRPAS SYNSPFFTTN SGAPVWNNNS SMTVGPRGPI LLEDYHLVEK LANFDRERIP ERVVHARGAS AKGFFEVTHD ISNLTCADFL RAPGVQTPVI
101: VRFSTVIHER GSPETLRDPR GFAVKFYTRE GNFDLVGNNF PVFFIRDGMK FPDMVHALKP NPKSHIQENW RILDFFSHHP ESLNMFTFLF DDIGIPQDYR
201: HMDGSGVNTY MLINKAGKAH YVKFHWKPTC GVKSLLEEDA IRVGGTNHSH ATQDLYDSIA AGNYPEWKLF IQIIDPADED KFDFDPLDVT KTWPEDILPL
301: QPVGRMVLNK NIDNFFAENE QLAFCPAIIV PGIHYSDDKL LQTRVFSYAD TQRHRLGPNY LQLPVNAPKC AHHNNHHEGF MNFMHRDEEV NYFPSRYDQV
401: RHAEKYPTPP AVCSGKRERC IIEKENNFKE PGERYRTFTP ERQERFIQRW IDALSDPRIT HEIRSIWISY WSQADKSLGQ KLASRLNVRP SI

Arabidopsis Description

CAT2catalase 2 [Source:TAIR;Acc:AT4G35090]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.