Factsheet for TraesCS6A01G041700.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	unclear
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G048300.3	Wheat	golgi, unclear	99.39	99.39
TraesCS6B01G056800.2	Wheat	cytosol	98.99	98.99
HORVU6Hr1G008640.5	Barley	endoplasmic reticulum, extracellular, mitochondrion	94.33	92.09
Os02t0115700-01	Rice	plastid	89.68	90.04
Zm00001d054044_P001	Maize	extracellular, mitochondrion, plasma membrane	86.23	86.23
GSMUA_Achr3P14360_001	Banana	peroxisome	83.2	83.54
OQU84207	Sorghum	peroxisome	86.44	83.07
VIT_04s0044g00020.t01	Wine grape	peroxisome	72.67	72.97
VIT_00s0698g00010.t01	Wine grape	peroxisome	72.67	72.97
TraesCS5A01G498000.1	Wheat	plastid	72.06	72.36
GSMUA_Achr1P17550_001	Banana	cytosol	16.19	71.43
TraesCS7A01G549800.1	Wheat	golgi, plastid, unclear	70.45	70.73
PGSC0003DMT400075611	Potato	cytosol	69.23	69.51
CDY31878	Canola	peroxisome	69.03	69.31
CDY33636	Canola	peroxisome	69.03	69.31
CDX96630	Canola	peroxisome	69.03	69.31
Solyc12g094620.1.1	Tomato	extracellular, plastid	69.03	69.31
Bra016459.1-P	Field mustard	peroxisome	69.03	69.31
CDY29519	Canola	peroxisome	68.83	69.11
Bra012238.1-P	Field mustard	peroxisome	68.83	69.11
Bra025832.1-P	Field mustard	peroxisome	68.83	69.11
CDY31488	Canola	mitochondrion	68.42	67.6
TraesCS7A01G549900.1	Wheat	cytosol	37.25	63.45
AT1G20620.6	Thale cress	mitochondrion	68.22	61.16
CDY01364	Canola	endoplasmic reticulum, vacuole	68.83	61.15

Protein Annotations

KEGG:00380+1.11.1.6	KEGG:00630+1.11.1.6	MapMan:10.2.1	Gene3D:2.40.180.10	InterPro:Catalase	InterPro:Catalase_AS
InterPro:Catalase_clade1/3	InterPro:Catalase_core	InterPro:Catalase_core_sf	InterPro:Catalase_haem_BS	InterPro:Catalase_immune_responsive	InterPro:Catalase_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004096	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979
GO:GO:0008150	GO:GO:0008152	GO:GO:0020037	GO:GO:0055114	InterPro:IPR018028	InterPro:IPR037060
PFAM:PF00199	PFAM:PF06628	PIRSF:PIRSF038928	PRINTS:PR00067	ScanProsite:PS00437	ScanProsite:PS00438
PFscan:PS51402	PANTHER:PTHR11465	PANTHER:PTHR11465:SF17	SMART:SM01060	SUPFAM:SSF56634	EnsemblPlantsGene:TraesCS6A01G041700
EnsemblPlants:TraesCS6A01G041700.1	TIGR:cd08154	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6A:+:22021384..22023331

Molecular Weight (calculated)

56919.2 Da

IEP (calculated)

7.061

GRAVY (calculated)

-0.533

Length

494 amino acids

Sequence
(BLAST)

001: MDPCKFRPSS SFDTKTTTTN AGQPVWNDNE ALTVGPRGPI LLEDYHLLEK IAHFARERIP ERVVHARGAS AKGFFECTHD VTGLTCADFL RAPGARTPVI
101: VRFSTVIHER GSPETIRDPR GFAVKFYTRE GNWDLLGNNF PVFFIRDGIK FPDVIHAFKP NPKSHVQEYW RVFDFLSHHP ESLHTFFFLF DDVGIPTDYR
201: HMDGFGVNTY TFVTRAGKSH YVKFHWRPTC GVSCLMDDEA TLVGGKNHSH ATQDLYDSID AGNFPEWKLF VQVIDPDDED RFDFDPLDDT KTWPEDLVPL
301: QPVGRLVLDR NVDNFFNENE QLAFGPGLVV PGIYYSDDKM LQCRVFAYAD TQRYRLGPNY LMLPVNAPKC GFKNNHYDGA MNFMHRDEEV DYYPSRHAPL
401: RQAEPASFPV PTRPVVGRRE KTRIKKENDF VQPGERYRSW APDRQDRFVR RFADALAHPK VSHELRVIWI DFLSKCDKSC GMKVANRLNV KPSM

Best Arabidopsis Sequence Match ( AT1G20620.1 )
(BLAST)

001: MDPYKYRPSS AYNAPFYTTN GGAPVSNNIS SLTIGERGPV LLEDYHLIEK VANFTRERIP ERVVHARGIS AKGFFEVTHD ISNLTCADFL RAPGVQTPVI
101: VRFSTVVHER ASPETMRDIR GFAVKFYTRE GNFDLVGNNT PVFFIRDGIQ FPDVVHALKP NPKTNIQEYW RILDYMSHLP ESLLTWCWMF DDVGIPQDYR
201: HMEGFGVHTY TLIAKSGKVL FVKFHWKPTC GIKNLTDEEA KVVGGANHSH ATKDLHDAIA SGNYPEWKLF IQTMDPADED KFDFDPLDVT KIWPEDILPL
301: QPVGRLVLNR TIDNFFNETE QLAFNPGLVV PGIYYSDDKL LQCRIFAYGD TQRHRLGPNY LQLPVNAPKC AHHNNHHEGF MNFMHRDEEI NYYPSKFDPV
401: RCAEKVPTPT NSYTGIRTKC VIKKENNFKQ AGDRYRSWAP DRQDRFVKRW VEILSEPRLT HEIRGIWISY WSQADRSLGQ KLASRLNVRP SI

Arabidopsis Description

CAT3catalase 3 [Source:TAIR;Acc:AT1G20620]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.