CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025832.1-P	Field mustard	peroxisome	97.6	99.19
CDY29519	Canola	peroxisome	97.6	99.19
CDX96630	Canola	peroxisome	97.2	98.78
CDY33636	Canola	peroxisome	97.2	98.78
CDY31878	Canola	peroxisome	97.0	98.58
CDY01364	Canola	endoplasmic reticulum, vacuole	97.4	87.59
AT1G20620.6	Thale cress	mitochondrion	96.0	87.11
VIT_04s0044g00020.t01	Wine grape	peroxisome	76.8	78.05
VIT_00s0698g00010.t01	Wine grape	peroxisome	76.8	78.05
CDY40645	Canola	peroxisome	75.4	77.73
CDY31877	Canola	cytosol	76.4	77.64
CDX76313	Canola	peroxisome, plastid	74.0	77.57
CDY01363	Canola	cytosol	76.2	77.44
CDY17510	Canola	peroxisome, plastid	73.8	77.36
CDX72514	Canola	peroxisome	74.0	77.08
CDX69111	Canola	peroxisome	73.4	76.46
CDY31490	Canola	cytoskeleton, cytosol, peroxisome	75.0	76.22
CDY29518	Canola	cytoskeleton, cytosol, peroxisome	74.8	76.02
Solyc12g094620.1.1	Tomato	extracellular, plastid	73.2	74.39
PGSC0003DMT400075611	Potato	cytosol	73.2	74.39
GSMUA_Achr3P14360_001	Banana	peroxisome	70.2	71.34
CDY52649	Canola	peroxisome	62.2	69.27
Os02t0115700-01	Rice	plastid	67.6	68.7
TraesCS6D01G048300.3	Wheat	golgi, unclear	67.8	68.62
TraesCS6B01G056800.2	Wheat	cytosol	67.8	68.62
TraesCS6A01G041700.1	Wheat	unclear	67.6	68.42
Zm00001d054044_P001	Maize	extracellular, mitochondrion, plasma membrane	66.8	67.61
OQU84207	Sorghum	peroxisome	67.4	65.56
HORVU6Hr1G008640.5	Barley	endoplasmic reticulum, extracellular, mitochondrion	65.4	64.62
HORVU6Hr1G008730.1	Barley	plastid	22.8	64.04
GSMUA_Achr1P17550_001	Banana	cytosol	12.8	57.14
CDY31866	Canola	extracellular, nucleus, peroxisome, plastid	15.0	37.31
CDY43951	Canola	plastid	14.4	33.03

Protein Annotations

KEGG:00380+1.11.1.6	KEGG:00630+1.11.1.6	MapMan:10.2.1	Gene3D:2.40.180.10	GO:A0A078H3S9	UniProt:A0A078H3S9
EnsemblPlants:CDY31488	ProteinID:CDY31488	ProteinID:CDY31488.1	InterPro:Catalase	InterPro:Catalase_clade1/3	InterPro:Catalase_core
InterPro:Catalase_core_sf	InterPro:Catalase_haem_BS	InterPro:Catalase_immune_responsive	InterPro:Catalase_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004096	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSBRNA2T00047774001
InterPro:IPR018028	InterPro:IPR037060	PFAM:PF00199	PFAM:PF06628	PIRSF:PIRSF038928	PRINTS:PR00067
ScanProsite:PS00437	PFscan:PS51402	PANTHER:PTHR11465	PANTHER:PTHR11465:SF34	SMART:SM01060	SUPFAM:SSF56634
UniParc:UPI0004EED7D5	:	:	:	:	:

Description

BnaC05g15970DBnaC05g15970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3S9]

Coordinates

chrLK032273:+:209993..212579

Molecular Weight (calculated)

57631.7 Da

IEP (calculated)

8.278

GRAVY (calculated)

-0.448

Length

500 amino acids

Sequence
(BLAST)

001: MVLFLPPKIK SLSYRPSSAY NSPFYTTNGG APVSNNISSL TIGERGPVLL EDYHLIEKVA NFTRERIPER VVHARGISAK GFFEVTHDIS NLTCADFLRA
101: PGVQTPVIVR FSTVVHERAS PETMRDIRGF AVKFYTREGN FDLVGNNTPV FFIRDGIQFP DVVHALKPNP KTNIQEYWRI LDYMSHLPES LLTWCWMFDD
201: VGIPQDYRHM EGFGVHTYTL VSKSGKVLFV KFHWKPTCGI KNLSDEEAKV VGGANHSHAT KDLHDAIASG NYPEWKLFIQ TMDPADEDKF DFDPLDVTKI
301: WPEDILPLQP VGRLVLNRTI DNFFNETEQL AFNPGLVVPG IYYSDDKLLQ CRIFAYGDTQ RHRLGPNYLQ LPVNAPKCAH HNNHHEGFMN FMHRDEEINY
401: YPSKFDPVRC AEKVPIPNKS YTGIRTKCII KKENNFKQPG DRYRSWAPDR QDRFVKRWVE ILSEPRLTHE IRSIWISYWS QADRSLGQKL ASRLNVRPSI

Best Arabidopsis Sequence Match ( AT1G20620.1 )
(BLAST)

001: MDPYKYRPSS AYNAPFYTTN GGAPVSNNIS SLTIGERGPV LLEDYHLIEK VANFTRERIP ERVVHARGIS AKGFFEVTHD ISNLTCADFL RAPGVQTPVI
101: VRFSTVVHER ASPETMRDIR GFAVKFYTRE GNFDLVGNNT PVFFIRDGIQ FPDVVHALKP NPKTNIQEYW RILDYMSHLP ESLLTWCWMF DDVGIPQDYR
201: HMEGFGVHTY TLIAKSGKVL FVKFHWKPTC GIKNLTDEEA KVVGGANHSH ATKDLHDAIA SGNYPEWKLF IQTMDPADED KFDFDPLDVT KIWPEDILPL
301: QPVGRLVLNR TIDNFFNETE QLAFNPGLVV PGIYYSDDKL LQCRIFAYGD TQRHRLGPNY LQLPVNAPKC AHHNNHHEGF MNFMHRDEEI NYYPSKFDPV
401: RCAEKVPTPT NSYTGIRTKC VIKKENNFKQ AGDRYRSWAP DRQDRFVKRW VEILSEPRLT HEIRGIWISY WSQADRSLGQ KLASRLNVRP SI

Arabidopsis Description

CAT3catalase 3 [Source:TAIR;Acc:AT1G20620]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.