CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
cytoskeleton 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29518	Canola	cytoskeleton, cytosol, peroxisome	99.8	99.8
Bra025833.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	99.59	99.59
CDY31877	Canola	cytosol	90.45	90.45
CDY01363	Canola	cytosol	90.45	90.45
AT1G20630.1	Thale cress	cytosol	90.04	90.04
Solyc04g082460.2.1	Tomato	plastid	85.77	85.77
PGSC0003DMT400025653	Potato	peroxisome	85.77	85.77
KRH17522	Soybean	mitochondrion	83.94	83.94
CDY40645	Canola	peroxisome	82.72	83.92
KRH51611	Soybean	peroxisome	83.74	83.74
KRH06008	Soybean	endoplasmic reticulum, mitochondrion, nucleus	83.74	83.74
CDX72514	Canola	peroxisome	81.5	83.54
KRH60933	Soybean	endoplasmic reticulum, extracellular, mitochondrion, nucleus	83.33	83.33
CDX76313	Canola	peroxisome, plastid	80.49	83.02
CDX69111	Canola	peroxisome	80.89	82.92
CDY17510	Canola	peroxisome, plastid	80.28	82.81
CDY29519	Canola	peroxisome	76.42	76.42
CDX96630	Canola	peroxisome	76.22	76.22
CDY33636	Canola	peroxisome	76.02	76.02
CDY31878	Canola	peroxisome	76.02	76.02
CDY31488	Canola	mitochondrion	76.22	75.0
CDY52649	Canola	peroxisome	68.09	74.61
CDY01364	Canola	endoplasmic reticulum, vacuole	76.22	67.45
CDY43951	Canola	plastid	15.85	35.78
CDY31866	Canola	extracellular, nucleus, peroxisome, plastid	14.02	34.33

Protein Annotations

KEGG:00380+1.11.1.6	KEGG:00630+1.11.1.6	MapMan:10.2.1	Gene3D:2.40.180.10	GO:A0A078GYC6	UniProt:A0A078GYC6
EnsemblPlants:CDY31490	ProteinID:CDY31490	ProteinID:CDY31490.1	InterPro:Catalase	InterPro:Catalase_AS	InterPro:Catalase_clade1/3
InterPro:Catalase_core	InterPro:Catalase_core_sf	InterPro:Catalase_haem_BS	InterPro:Catalase_immune_responsive	InterPro:Catalase_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004096	GO:GO:0004601	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037
GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSBRNA2T00047776001	InterPro:IPR018028
InterPro:IPR037060	PFAM:PF00199	PFAM:PF06628	PIRSF:PIRSF038928	PRINTS:PR00067	ScanProsite:PS00437
ScanProsite:PS00438	PFscan:PS51402	PANTHER:PTHR11465	PANTHER:PTHR11465:SF34	SMART:SM01060	SUPFAM:SSF56634
UniParc:UPI0004EC1274	:	:	:	:	:

Description

BnaC05g15990DCatalase [Source:UniProtKB/TrEMBL;Acc:A0A078GYC6]

Coordinates

chrLK032273:+:216384..218935

Molecular Weight (calculated)

56662.9 Da

IEP (calculated)

6.922

GRAVY (calculated)

-0.554

Length

492 amino acids

Sequence
(BLAST)

001: MDPERVRPSS AHDSPFWTTN SGAPVWNNNA SLTVGPRGPI LLEDYHLIEK LANFDRERIP ERVVHARGAS AKGFFEVTHD ISNLSCADFL RGTGVQTPVI
101: ARFSTVIHER GSPETLRDPR GFAVKFYTRE GNLDLVGNNF PVFFVRDGMK FPDMVHALKP NPKSHIQENW RILDFFSHHP ESLHMFSFLF DDVGIPQDYR
201: HMDGFGVNTY VLINKAGKAH FVKFHWKPTC PVKCLSDEEA IRVGGTNHSH ATKDLYDSIA AGSFPEWHMF IQVIDPDHED KFDFDPLDVT KIWPEDILPL
301: QPVGRLVLNK NIDNFFNENE QLAFCPAIVV PGFHYSDDKL LQSRIFSYAD SQRHRLGPNY LQLPVNAPKC AHHNNHHEGL MNFMHRDEEV NYFPSRLNPV
401: RHAEKYPQNP IACAGNREKC MIEKENNFKQ PGERYRSWDA DRQERFVKRF VDALAEPRVT HEIRSIWISN WTKADESLGQ KLATRLNVSP NF

Best Arabidopsis Sequence Match ( AT1G20630.1 )
(BLAST)

001: MDPYRVRPSS AHDSPFFTTN SGAPVWNNNS SLTVGTRGPI LLEDYHLLEK LANFDRERIP ERVVHARGAS AKGFFEVTHD ITQLTSADFL RGPGVQTPVI
101: VRFSTVIHER GSPETLRDPR GFAVKFYTRE GNFDLVGNNF PVFFVRDGMK FPDMVHALKP NPKSHIQENW RILDFFSHHP ESLHMFSFLF DDLGIPQDYR
201: HMEGAGVNTY MLINKAGKAH YVKFHWKPTC GIKCLSDEEA IRVGGANHSH ATKDLYDSIA AGNYPQWNLF VQVMDPAHED KFDFDPLDVT KIWPEDILPL
301: QPVGRLVLNK NIDNFFNENE QIAFCPALVV PGIHYSDDKL LQTRIFSYAD SQRHRLGPNY LQLPVNAPKC AHHNNHHDGF MNFMHRDEEV NYFPSRLDPV
401: RHAEKYPTTP IVCSGNREKC FIGKENNFKQ PGERYRSWDS DRQERFVKRF VEALSEPRVT HEIRSIWISY WSQADKSLGQ KLATRLNVRP NF

Arabidopsis Description

CAT1Catalase [Source:UniProtKB/TrEMBL;Acc:Q0WUH6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.