CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 1
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17510	Canola	peroxisome, plastid	99.79	99.79
CDX72514	Canola	peroxisome	97.48	96.88
Bra034674.1-P	Field mustard	peroxisome, plastid	98.95	96.52
CDX69111	Canola	peroxisome	97.06	96.46
CDY40645	Canola	peroxisome	96.02	94.43
AT4G35090.3	Thale cress	peroxisome	97.27	94.31
CDY52649	Canola	peroxisome	82.81	87.97
VIT_18s0122g01320.t01	Wine grape	peroxisome	89.52	86.79
CDY01363	Canola	cytosol	85.74	83.13
CDY31877	Canola	cytosol	85.33	82.72
CDY29518	Canola	cytoskeleton, cytosol, peroxisome	83.23	80.69
CDY31490	Canola	cytoskeleton, cytosol, peroxisome	83.02	80.49
CDY29519	Canola	peroxisome	77.57	75.2
CDX96630	Canola	peroxisome	77.36	75.0
CDY31878	Canola	peroxisome	77.15	74.8
CDY33636	Canola	peroxisome	77.15	74.8
CDY31488	Canola	mitochondrion	77.57	74.0
CDY01364	Canola	endoplasmic reticulum, vacuole	77.36	66.37
CDY43951	Canola	plastid	20.34	44.5
CDY31866	Canola	extracellular, nucleus, peroxisome, plastid	18.24	43.28

Protein Annotations

KEGG:00380+1.11.1.6	KEGG:00630+1.11.1.6	MapMan:10.2.1	Gene3D:2.40.180.10	GO:A0A078CMJ6	EnsemblPlants:CDX76313
ProteinID:CDX76313	ProteinID:CDX76313.1	InterPro:Catalase	InterPro:Catalase_AS	InterPro:Catalase_clade1/3	InterPro:Catalase_core
InterPro:Catalase_core_sf	InterPro:Catalase_haem_BS	InterPro:Catalase_immune_responsive	InterPro:Catalase_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004096	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0020037	GO:GO:0042744	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00126684001
InterPro:IPR018028	InterPro:IPR037060	PFAM:PF00199	PFAM:PF06628	PIRSF:PIRSF038928	PRINTS:PR00067
ScanProsite:PS00437	ScanProsite:PS00438	PFscan:PS51402	PANTHER:PTHR11465	PANTHER:PTHR11465:SF34	SMART:SM01060
SUPFAM:SSF56634	UniParc:UPI0004EF1462	:	:	:	:

Description

BnaA08g10870D

Coordinates

chrLK031807:-:296274..298702

Molecular Weight (calculated)

55131.1 Da

IEP (calculated)

6.991

GRAVY (calculated)

-0.575

Length

477 amino acids

Sequence
(BLAST)

001: MQYRPASSYN SPFFTTNSGA PVWNNNSSMT VGPRGPILLE DYHLVEKLAN FDRERIPERV VHARGASAKG FFEVTHDISN LTCADFLRAP GVQTPVIVRF
101: STVIHERGSP ETLRDPRGFA VKFYTREGNF DLVGNNFPVF FIRDGMKFPD MVHALKPNPK SHIQENWRVL DFFSHHPESL NMFTFLFDDI GIPQDYRHME
201: GSGVNTYMLI NKSGKAHYSL LEEDAVRVGG TNHSHATQDL YDSIAAGNYP EWKLFIQVID PADEDKFDFD PLDVTKTWPE NLLPLQPVGR MVLNKNIDNF
301: FAENEQLAFC PAIIVPGIHY SDDKLLQTRV FSYADTQRHR LGPNYLQLPV NAPKCAHHNN HHEGFMNFMH RDEEVNYFPS RYDPVRHAEK YPTPPAVCSG
401: KRERCVIEKE NNFKEPGERY RSFTPERQER FIRRWIEALS DPRITHEIRS IWISYWSQAD KTLGQKLASR LNVRPSI

Best Arabidopsis Sequence Match ( AT4G35090.3 )
(BLAST)

001: MMMMQYRPAS SYNSPFFTTN SGAPVWNNNS SMTVGPRGPI LLEDYHLVEK LANFDRERIP ERVVHARGAS AKGFFEVTHD ISNLTCADFL RAPGVQTPVI
101: VRFSTVIHER GSPETLRDPR GFAVKFYTRE GNFDLVGNNF PVFFIRDGMK FPDMVHALKP NPKSHIQENW RILDFFSHHP ESLNMFTFLF DDIGIPQDYR
201: HMDGSGVNTY MLINKAGKAH YVKFHWKPTC GVKSLLEEDA IRVGGTNHSH ATQDLYDSIA AGNYPEWKLF IQIIDPADED KFDFDPLDVT KTWPEDILPL
301: QPVGRMVLNK NIDNFFAENE QLAFCPAIIV PGIHYSDDKL LQTRVFSYAD TQRHRLGPNY LQLPVNAPKC AHHNNHHEGF MNFMHRDEEV NYFPSRYDQV
401: RHAEKYPTPP AVCSGKRERC IIEKENNFKE PGERYRTFTP ERQERFIQRW IDALSDPRIT HEIRSIWISY WSQADKSLGQ KLASRLNVRP SI

Arabidopsis Description

CAT2catalase 2 [Source:TAIR;Acc:AT4G35090]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.