Factsheet for VIT_18s0122g01320.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 5
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017693.1-P	Field mustard	peroxisome	89.84	91.13
CDY40645	Canola	peroxisome	89.63	90.93
AT4G35090.3	Thale cress	peroxisome	90.65	90.65
CDX72514	Canola	peroxisome	88.21	90.42
CDX76313	Canola	peroxisome, plastid	86.79	89.52
CDY17510	Canola	peroxisome, plastid	86.59	89.31
Bra034674.1-P	Field mustard	peroxisome, plastid	88.62	89.16
CDX69111	Canola	peroxisome	86.79	88.96
VIT_00s0698g00010.t01	Wine grape	peroxisome	85.98	85.98
VIT_04s0044g00020.t01	Wine grape	peroxisome	85.98	85.98
Bra011584.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	88.62	83.21
CDY52649	Canola	peroxisome	74.19	81.29

Protein Annotations

KEGG:00380+1.11.1.6	KEGG:00630+1.11.1.6	MapMan:10.2.1	EntrezGene:100244516	wikigene:100244516	Gene3D:2.40.180.10
ProteinID:CBI40714	ProteinID:CBI40714.3	InterPro:Catalase	InterPro:Catalase_AS	InterPro:Catalase_clade1/3	InterPro:Catalase_core
InterPro:Catalase_core_sf	InterPro:Catalase_haem_BS	InterPro:Catalase_immune_responsive	InterPro:Catalase_sf	UniProt:D7UD99	EMBL:FN596759
GO:GO:0003674	GO:GO:0003824	GO:GO:0004096	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005777	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491
GO:GO:0020037	GO:GO:0042542	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869
InterPro:IPR018028	InterPro:IPR037060	EntrezGene:LOC100244516	wikigene:LOC100244516	PFAM:PF00199	PFAM:PF06628
PIRSF:PIRSF038928	PRINTS:PR00067	ScanProsite:PS00437	ScanProsite:PS00438	PFscan:PS51402	PANTHER:PTHR11465
PANTHER:PTHR11465:SF34	SMART:SM01060	SUPFAM:SSF56634	TIGR:TC51816	UniParc:UPI000198513D	ArrayExpress:VIT_18s0122g01320
EnsemblPlantsGene:VIT_18s0122g01320	EnsemblPlants:VIT_18s0122g01320.t01	unigene:Vvi.7843	RefSeq:XP_002270703	RefSeq:XP_002270703.2	RefSeq:XP_010663966.1

Description

Catalase [Source:UniProtKB/TrEMBL;Acc:D7UD99]

Coordinates

chr18:-:927498..932079

Molecular Weight (calculated)

56970.2 Da

IEP (calculated)

7.390

GRAVY (calculated)

-0.583

Length

492 amino acids

Sequence
(BLAST)

001: MDPYKYRPSS AYNSPFWTTN SGAPVWNNNS SLTVGPRGPI LLEDYHLVEK LANFDRERIP ERVVHARGAS AKGFFETTHD ISNLTCADFL RAPGVQTPVI
101: LRFSTVIHER GSPETLRDPR GFAVKFYTRE GNFDLVGNNF PVFFIRDGMK FPDMVHALKP NPKSHIQENW RIVDFFSHHP ESLHMFSFLF DDVGIPQDYR
201: HMEGSGVNTY TLINKAGKAH YVKFHWKPTC GVKCLLEEEA IRVGGSNHSH ATQDLYDSIA AGNYPEWKLF IQTIDPDHED KFDFDPLDVT KTWPEDILPL
301: QPVGRLVLNR NIDNFFAENE QLAFCPAIVV PGVYYSDDKL LQTRIFSYSD TQRHRLGPNY LQLPANAPKC AHHNNHHEGF MNFMHRDEEV NYFPSRYDPV
401: RHAERYPIPP AILTGRREKC IIPKENNFKQ PGERYRSFAP DRQERFIQRW VDALSDPRVT YEIRSIWISY WSQADKSLGQ KLASRLNVRP SI

Best Arabidopsis Sequence Match ( AT4G35090.1 )
(BLAST)

001: MDPYKYRPAS SYNSPFFTTN SGAPVWNNNS SMTVGPRGPI LLEDYHLVEK LANFDRERIP ERVVHARGAS AKGFFEVTHD ISNLTCADFL RAPGVQTPVI
101: VRFSTVIHER GSPETLRDPR GFAVKFYTRE GNFDLVGNNF PVFFIRDGMK FPDMVHALKP NPKSHIQENW RILDFFSHHP ESLNMFTFLF DDIGIPQDYR
201: HMDGSGVNTY MLINKAGKAH YVKFHWKPTC GVKSLLEEDA IRVGGTNHSH ATQDLYDSIA AGNYPEWKLF IQIIDPADED KFDFDPLDVT KTWPEDILPL
301: QPVGRMVLNK NIDNFFAENE QLAFCPAIIV PGIHYSDDKL LQTRVFSYAD TQRHRLGPNY LQLPVNAPKC AHHNNHHEGF MNFMHRDEEV NYFPSRYDQV
401: RHAEKYPTPP AVCSGKRERC IIEKENNFKE PGERYRTFTP ERQERFIQRW IDALSDPRIT HEIRSIWISY WSQADKSLGQ KLASRLNVRP SI

Arabidopsis Description

CAT2catalase 2 [Source:TAIR;Acc:AT4G35090]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.