Factsheet for VIT_04s0044g00020.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 5
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0698g00010.t01	Wine grape	peroxisome	100.0	100.0
VIT_18s0122g01320.t01	Wine grape	peroxisome	85.98	85.98
GSMUA_Achr3P14360_001	Banana	peroxisome	78.86	78.86
Bra025832.1-P	Field mustard	peroxisome	78.66	78.66
CDY29519	Canola	peroxisome	78.66	78.66
Bra012238.1-P	Field mustard	peroxisome	78.46	78.46
Solyc12g094620.1.1	Tomato	extracellular, plastid	78.46	78.46
CDX96630	Canola	peroxisome	78.46	78.46
Bra016459.1-P	Field mustard	peroxisome	78.46	78.46
CDY31878	Canola	peroxisome	78.25	78.25
CDY33636	Canola	peroxisome	78.25	78.25
PGSC0003DMT400075611	Potato	cytosol	78.25	78.25
CDY31488	Canola	mitochondrion	78.05	76.8
Os02t0115700-01	Rice	plastid	73.58	73.58
TraesCS6B01G056800.2	Wheat	cytosol	73.37	73.08
TraesCS6D01G048300.3	Wheat	golgi, unclear	73.17	72.87
TraesCS6A01G041700.1	Wheat	unclear	72.97	72.67
Zm00001d054044_P001	Maize	extracellular, mitochondrion, plasma membrane	71.75	71.46
OQU84207	Sorghum	peroxisome	72.76	69.65
CDY01364	Canola	endoplasmic reticulum, vacuole	78.46	69.42
AT1G20620.6	Thale cress	mitochondrion	77.64	69.33
HORVU6Hr1G008640.5	Barley	endoplasmic reticulum, extracellular, mitochondrion	70.53	68.58
HORVU6Hr1G008730.1	Barley	plastid	23.58	65.17
GSMUA_Achr1P17550_001	Banana	cytosol	14.63	64.29

Protein Annotations

KEGG:00380+1.11.1.6	KEGG:00630+1.11.1.6	MapMan:10.2.1	EntrezGene:100232861	wikigene:100232861	EntrezGene:100853165
wikigene:100853165	Gene3D:2.40.180.10	ProteinID:AAL83720	ProteinID:AAL83720.1	EMBL:AF236127	ProteinID:CCB53994
ProteinID:CCB53994.1	ProteinID:CCB60470	ProteinID:CCB60470.1	InterPro:Catalase	InterPro:Catalase_AS	InterPro:Catalase_clade1/3
InterPro:Catalase_core	InterPro:Catalase_core_sf	InterPro:Catalase_haem_BS	InterPro:Catalase_immune_responsive	InterPro:Catalase_sf	UniProt:F6I0K4
EMBL:FN595833	EMBL:FN596506	EntrezGene:GCAT	wikigene:GCAT	GO:GO:0003674	GO:GO:0003824
GO:GO:0004096	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005777	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037	GO:GO:0042542
GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:IPR018028	InterPro:IPR037060
EntrezGene:LOC100853165	wikigene:LOC100853165	PFAM:PF00199	PFAM:PF06628	PIRSF:PIRSF038928	PRINTS:PR00067
ScanProsite:PS00437	ScanProsite:PS00438	PFscan:PS51402	PANTHER:PTHR11465	PANTHER:PTHR11465:SF34	SMART:SM01060
SUPFAM:SSF56634	TIGR:TC53261	TIGR:TC60526	TIGR:TC70144	UniParc:UPI0001986057	ArrayExpress:VIT_04s0044g00020
EnsemblPlantsGene:VIT_04s0044g00020	EnsemblPlants:VIT_04s0044g00020.t01	unigene:Vvi.6363	RefSeq:XP_003631925	RefSeq:XP_003631925.1	:

Description

Catalase [Source:UniProtKB/TrEMBL;Acc:F6I0K4]

Coordinates

chr4:+:20659987..20665809

Molecular Weight (calculated)

56969.2 Da

IEP (calculated)

7.208

GRAVY (calculated)

-0.549

Length

492 amino acids

Sequence
(BLAST)

001: MDPYKYRPSS AYNSPYFTTN AGAPVYNNDS SLTVGSRGPV LLEDYHLVEK LANFQRERIP ERVVHARGAS AKGFFEVTHD VSDLTCADFL RAPGVQTPVI
101: VRFSTVIHER GSPETIRDPR GFAVKFYTRE GNFDMVGNNF PVFFIRDAMK FPDVIHAFKP NPKSHIQEYW RVVDFLSYHP ESLSTFAFLF DDVGVPQDYR
201: HMEGFGVHTF TLINKAGKAN YVKFHWKPTC GVKCLLEDEA IRVGGTNHSH ATQDLYDSIK AGNYPEWKLF IQTMDPEHED KFDFDPLDVT KTWPEDILPL
301: QPVGRLVLNK NIDNFFAENE MLAFNPALVV PGIYYTNDKM LQGRIFAYSD TQRHRLGPNY LQLPVNAPKC AFHNNHHDGS MNFMHRDEEV DYFPSRFDPV
401: RHAETFPIPS TICHGKREKV VIEKENNFKQ PGERYRSFAP DRQERFINRW VETLSDPRVT YEIRSIWISY WSQADRSLGQ KLASRLNVKP KY

Best Arabidopsis Sequence Match ( AT4G35090.1 )
(BLAST)

001: MDPYKYRPAS SYNSPFFTTN SGAPVWNNNS SMTVGPRGPI LLEDYHLVEK LANFDRERIP ERVVHARGAS AKGFFEVTHD ISNLTCADFL RAPGVQTPVI
101: VRFSTVIHER GSPETLRDPR GFAVKFYTRE GNFDLVGNNF PVFFIRDGMK FPDMVHALKP NPKSHIQENW RILDFFSHHP ESLNMFTFLF DDIGIPQDYR
201: HMDGSGVNTY MLINKAGKAH YVKFHWKPTC GVKSLLEEDA IRVGGTNHSH ATQDLYDSIA AGNYPEWKLF IQIIDPADED KFDFDPLDVT KTWPEDILPL
301: QPVGRMVLNK NIDNFFAENE QLAFCPAIIV PGIHYSDDKL LQTRVFSYAD TQRHRLGPNY LQLPVNAPKC AHHNNHHEGF MNFMHRDEEV NYFPSRYDQV
401: RHAEKYPTPP AVCSGKRERC IIEKENNFKE PGERYRTFTP ERQERFIQRW IDALSDPRIT HEIRSIWISY WSQADKSLGQ KLASRLNVRP SI

Arabidopsis Description

CAT2catalase 2 [Source:TAIR;Acc:AT4G35090]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.