Factsheet for Solyc12g094620.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

nucleus 1
peroxisome 5
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 20363867
extracellular: 20496099
extracellular: 22364583
plastid: 22908117
nucleus: 25464976
plastid: 26371478
nucleus: 28394025
extracellular: 29876421

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

msms PMID: 20496099 doi

D Dahal, A Pich, HP Braun, K Wydra

Institute for Plant Diseases and Plant Protection, Faculty of Natural Sciences, Leibniz Universität Hannover, Herrenhäuser Str.2, 30419 Hannover, Germany. dahal@ipp.uni-hannover.de

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400075611	Potato	cytosol	98.37	98.37
VIT_00s0698g00010.t01	Wine grape	peroxisome	78.46	78.46
VIT_04s0044g00020.t01	Wine grape	peroxisome	78.46	78.46
Solyc04g082460.2.1	Tomato	plastid	78.25	78.25
Solyc02g082760.2.1	Tomato	plastid	76.02	76.02
Solyc01g100630.1.1	Tomato	cytosol	7.93	75.0
CDX96630	Canola	peroxisome	74.39	74.39
CDY29519	Canola	peroxisome	74.39	74.39
Bra025832.1-P	Field mustard	peroxisome	74.39	74.39
Bra016459.1-P	Field mustard	peroxisome	74.39	74.39
Bra012238.1-P	Field mustard	peroxisome	74.39	74.39
CDY31878	Canola	peroxisome	74.19	74.19
CDY33636	Canola	peroxisome	74.19	74.19
CDY31488	Canola	mitochondrion	74.39	73.2
GSMUA_Achr3P14360_001	Banana	peroxisome	72.56	72.56
TraesCS6B01G056800.2	Wheat	cytosol	69.31	69.03
TraesCS6A01G041700.1	Wheat	unclear	69.31	69.03
TraesCS6D01G048300.3	Wheat	golgi, unclear	69.11	68.83
Os02t0115700-01	Rice	plastid	68.5	68.5
Zm00001d054044_P001	Maize	extracellular, mitochondrion, plasma membrane	67.68	67.41
AT1G20620.6	Thale cress	mitochondrion	74.39	66.42
CDY01364	Canola	endoplasmic reticulum, vacuole	74.39	65.83
OQU84207	Sorghum	peroxisome	68.29	65.37
Solyc01g099420.1.1	Tomato	cytosol	12.6	65.26
HORVU6Hr1G008640.5	Barley	endoplasmic reticulum, extracellular, mitochondrion	66.87	65.02
HORVU6Hr1G008730.1	Barley	plastid	22.76	62.92
GSMUA_Achr1P17550_001	Banana	cytosol	12.6	55.36
Solyc01g100640.2.1	Tomato	peroxisome	16.06	54.86

Protein Annotations

KEGG:00380+1.11.1.6	KEGG:00630+1.11.1.6	MapMan:10.2.1	Gene3D:2.40.180.10	InterPro:Catalase	InterPro:Catalase_AS
InterPro:Catalase_clade1/3	InterPro:Catalase_core	InterPro:Catalase_core_sf	InterPro:Catalase_haem_BS	InterPro:Catalase_immune_responsive	InterPro:Catalase_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004096	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005777	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491
GO:GO:0020037	GO:GO:0042542	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869
InterPro:IPR018028	InterPro:IPR037060	UniProt:K4DH34	PFAM:PF00199	PFAM:PF06628	PIRSF:PIRSF038928
PRINTS:PR00067	ScanProsite:PS00437	ScanProsite:PS00438	PFscan:PS51402	PANTHER:PTHR11465	PANTHER:PTHR11465:SF34
SMART:SM01060	SUPFAM:SSF56634	EnsemblPlantsGene:Solyc12g094620.1	EnsemblPlants:Solyc12g094620.1.1	UniParc:UPI000276989D	:

Description

Catalase-3 [Source:Projected from Arabidopsis thaliana (AT1G20620) UniProtKB/Swiss-Prot;Acc:Q42547]

Coordinates

chr12:+:64801796..64803844

Molecular Weight (calculated)

56522.8 Da

IEP (calculated)

7.031

GRAVY (calculated)

-0.528

Length

492 amino acids

Sequence
(BLAST)

001: MIVTQYRPSS AYDTPFLTTN AGGPVYNNVS SLTVGPRGPV LLEDYYLIEK LATFDREKIP ERVVHARGAS AKGFFEVTHD ISHLTCADFL RAPGAQTPVI
101: CRFSTVVHER GSPESIRDIR GFAVKFYTRE GNFDLVGNNV PVFFNRDAKS FPDTIRALKP NPKSHIQENW RILDFFSFLP ESLHTFAFFY DDVCLPTDYR
201: HMEGFGVHAY QLINKEGKAH YVKFHWKPTC GVKCMSEEEA IRVGGTNHSH ATKDLYDSIA AGNYPEWKLF IQTMDPEDVD KFDFDPLDVT KTWPEDLLPL
301: IPVGRLVLNR NIDNFFAENE QLAFNPGHIV PGIYYSEDKL LQTRIFAYAD TQRHRIGPNY MQLPVNAPKC GHHNNHRDGA MNMTHRDEEV DYLPSRFDPC
401: RPAEQYPIPS CVLNGRRTNC VIPKENNFKQ AGERYRSWEP DRQDRYINKW VESLSDPRVT HEIRSIWISY LSQADKSCGQ KVASRLTVKP TM

Best Arabidopsis Sequence Match ( AT4G35090.3 )
(BLAST)

001: MMMMQYRPAS SYNSPFFTTN SGAPVWNNNS SMTVGPRGPI LLEDYHLVEK LANFDRERIP ERVVHARGAS AKGFFEVTHD ISNLTCADFL RAPGVQTPVI
101: VRFSTVIHER GSPETLRDPR GFAVKFYTRE GNFDLVGNNF PVFFIRDGMK FPDMVHALKP NPKSHIQENW RILDFFSHHP ESLNMFTFLF DDIGIPQDYR
201: HMDGSGVNTY MLINKAGKAH YVKFHWKPTC GVKSLLEEDA IRVGGTNHSH ATQDLYDSIA AGNYPEWKLF IQIIDPADED KFDFDPLDVT KTWPEDILPL
301: QPVGRMVLNK NIDNFFAENE QLAFCPAIIV PGIHYSDDKL LQTRVFSYAD TQRHRLGPNY LQLPVNAPKC AHHNNHHEGF MNFMHRDEEV NYFPSRYDQV
401: RHAEKYPTPP AVCSGKRERC IIEKENNFKE PGERYRTFTP ERQERFIQRW IDALSDPRIT HEIRSIWISY WSQADKSLGQ KLASRLNVRP SI

Arabidopsis Description

CAT2catalase 2 [Source:TAIR;Acc:AT4G35090]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.