Factsheet for Solyc02g082760.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 2
peroxisome 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117
nucleus: 28394025
extracellular: 29876421

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003986	Potato	cytosol	99.39	99.39
Solyc04g082460.2.1	Tomato	plastid	86.18	86.18
Solyc01g100630.1.1	Tomato	cytosol	8.54	80.77
Solyc12g094620.1.1	Tomato	extracellular, plastid	76.02	76.02
Solyc01g099420.1.1	Tomato	cytosol	14.63	75.79
Solyc01g100640.2.1	Tomato	peroxisome	21.54	73.61

Protein Annotations

KEGG:00380+1.11.1.6	KEGG:00630+1.11.1.6	MapMan:10.2.1	Gene3D:2.40.180.10	InterPro:Catalase	InterPro:Catalase_AS
InterPro:Catalase_clade1/3	InterPro:Catalase_core	InterPro:Catalase_core_sf	InterPro:Catalase_haem_BS	InterPro:Catalase_immune_responsive	InterPro:Catalase_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004096	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005777	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491
GO:GO:0020037	GO:GO:0042542	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869
InterPro:IPR018028	InterPro:IPR037060	UniProt:K4BAE6	EMBL:LN880542	PFAM:PF00199	PFAM:PF06628
PIRSF:PIRSF038928	PRINTS:PR00067	ScanProsite:PS00437	ScanProsite:PS00438	PFscan:PS51402	PANTHER:PTHR11465
PANTHER:PTHR11465:SF34	SMART:SM01060	SUPFAM:SSF56634	EnsemblPlantsGene:Solyc02g082760.2	EnsemblPlants:Solyc02g082760.2.1	UniParc:UPI00027680FD

Description

Catalase-2 [Source:Projected from Arabidopsis thaliana (AT4G35090) UniProtKB/Swiss-Prot;Acc:P25819]

Coordinates

chr2:-:46402605..46406986

Molecular Weight (calculated)

56899.2 Da

IEP (calculated)

7.217

GRAVY (calculated)

-0.540

Length

492 amino acids

Sequence
(BLAST)

001: MDPYKYRPSS AFNSPFCTTN SGAPVFNNNS SLTVGARGPV LLEDYHLVEK LANFDRERIA ERVVHARGAS AKGFFEVTHD IAHLTCADFL RAPGVQTPVI
101: VRFSTVIHER GSPETLRDPR GFAVKFYTRE GNFDLVGNNF PVFFIRDGMK FPDMVHALKP NPKSHIQENW RVLDFFSHHP ESLHMFTFLF DDIGIPQDYR
201: HMDGSGVHTF TLINRAGKST YVKFHWKPTC GVKSLLEEEA IRVGGANHSH ATQDLYDSIA AGNYPEWKLF IQIMDPEHED KFDFDPLDVT KTWPEDILPL
301: QPVGRLVLNK NIDNFFNENE QLAFCPSIVV PGVYYSDDKM LQTRIFSYSD TQRYRLGPNY LQLPANAPKC AHHNNHYDGS MNFMHRDEEI DYFPSRYDQV
401: RHAEVYPIPS TVCSGKREKC IIQKENNFKQ PGERYRSFTP DRQERFIRRW VEALSDPRIT YEIRSIWITY WSQADKSLGQ KLASRLNVRP SI

Best Arabidopsis Sequence Match ( AT4G35090.1 )
(BLAST)

001: MDPYKYRPAS SYNSPFFTTN SGAPVWNNNS SMTVGPRGPI LLEDYHLVEK LANFDRERIP ERVVHARGAS AKGFFEVTHD ISNLTCADFL RAPGVQTPVI
101: VRFSTVIHER GSPETLRDPR GFAVKFYTRE GNFDLVGNNF PVFFIRDGMK FPDMVHALKP NPKSHIQENW RILDFFSHHP ESLNMFTFLF DDIGIPQDYR
201: HMDGSGVNTY MLINKAGKAH YVKFHWKPTC GVKSLLEEDA IRVGGTNHSH ATQDLYDSIA AGNYPEWKLF IQIIDPADED KFDFDPLDVT KTWPEDILPL
301: QPVGRMVLNK NIDNFFAENE QLAFCPAIIV PGIHYSDDKL LQTRVFSYAD TQRHRLGPNY LQLPVNAPKC AHHNNHHEGF MNFMHRDEEV NYFPSRYDQV
401: RHAEKYPTPP AVCSGKRERC IIEKENNFKE PGERYRTFTP ERQERFIQRW IDALSDPRIT HEIRSIWISY WSQADKSLGQ KLASRLNVRP SI

Arabidopsis Description

CAT2catalase 2 [Source:TAIR;Acc:AT4G35090]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.