Factsheet for TraesCS4B01G396300.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 3
endoplasmic reticulum 5
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G029900.1	Wheat	endoplasmic reticulum	96.48	96.11
TraesCS5A01G558100.1	Wheat	endoplasmic reticulum, golgi	60.16	95.65
TraesCS6B01G125800.1	Wheat	endoplasmic reticulum	82.81	81.38
TraesCS6B01G017000.1	Wheat	endoplasmic reticulum	81.45	80.04
Os12t0268000-01	Rice	plasma membrane	79.88	78.2
EES19131	Sorghum	endoplasmic reticulum	77.73	76.98
Zm00001d023625_P001	Maize	endoplasmic reticulum	78.71	76.62
Zm00001d048626_P001	Maize	endoplasmic reticulum, extracellular	57.81	65.34
GSMUA_Achr3P17080_001	Banana	endoplasmic reticulum	53.52	55.92
Solyc09g014900.2.1	Tomato	endoplasmic reticulum	50.78	52.53
PGSC0003DMT400068437	Potato	endoplasmic reticulum	51.95	52.16
VIT_17s0000g09610.t01	Wine grape	endoplasmic reticulum, golgi	41.41	41.81
TraesCS2B01G357200.1	Wheat	endoplasmic reticulum	38.09	38.16
TraesCS2B01G576700.1	Wheat	cytosol	30.86	36.32
TraesCS3B01G596800.1	Wheat	endoplasmic reticulum, golgi, plastid	35.35	35.7
TraesCS3B01G597000.1	Wheat	endoplasmic reticulum, golgi	35.35	35.63
TraesCS3B01G597200.1	Wheat	endoplasmic reticulum, golgi	35.16	35.43
TraesCS7B01G037600.1	Wheat	plasma membrane	35.35	35.28
TraesCS5B01G570200.1	Wheat	endoplasmic reticulum, golgi	35.35	35.21
TraesCS5B01G570300.1	Wheat	endoplasmic reticulum, golgi	35.35	35.21
TraesCS3B01G596400.1	Wheat	endoplasmic reticulum, golgi	34.77	35.04
TraesCS7B01G253300.1	Wheat	endoplasmic reticulum	34.38	34.85
TraesCS7B01G108700.1	Wheat	extracellular, golgi, mitochondrion, plastid	35.35	34.74
TraesCS3B01G596600.1	Wheat	endoplasmic reticulum, golgi	34.38	34.71
TraesCS5B01G533200.1	Wheat	plastid	34.77	34.1
TraesCS5B01G287300.1	Wheat	endoplasmic reticulum, extracellular	34.18	34.05
TraesCS3B01G509000.1	Wheat	golgi, plastid	33.98	33.98
TraesCS5B01G548400.1	Wheat	endoplasmic reticulum	33.79	33.08
TraesCS2B01G027600.1	Wheat	endoplasmic reticulum, golgi	32.81	32.81
TraesCS4B01G388500.1	Wheat	endoplasmic reticulum, extracellular	32.62	32.18
TraesCS5B01G548300.1	Wheat	endoplasmic reticulum, extracellular, golgi	32.81	31.4
TraesCS7B01G037400.1	Wheat	endoplasmic reticulum, golgi, plastid	21.48	31.25

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0016705	GO:GO:0020037	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385
PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF201	SUPFAM:SSF48264	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS4B01G396300	EnsemblPlants:TraesCS4B01G396300.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4B:-:670796826..670799118

Molecular Weight (calculated)

57427.5 Da

IEP (calculated)

6.456

GRAVY (calculated)

-0.084

Length

512 amino acids

Sequence
(BLAST)

001: MELNFASYVS IVLLVLSGTY VYCATRSRSP LRLPPSPPGW PVIGHLHLMT DMPHHALAEL ARSMRAPLLR LQLGSIPAVV ISKPDLAREA LTTNDAAMAS
101: RPHLLSGQFL SFGCSDVTFA PAGAYHRMVR RVVVSDLVSP RRVATYGSFR DEELRRLLAH LTESASTTET SVNLSKCLLN LANDVLCRIA FGRRFPHGKD
201: DKLAAVLAES QDLYAGFAIG DFFPELEPLA STLTGLRRRL KSCLADLREV CDEIIEEHIS GQRQRIPGDR DEDFVDVLLR AQKAADLKVP LTDDNLKSIV
301: LDIFIAGTDT TFATIEWTMT ELMRHPRILR KAQDEVRWVV GAKGQVEESD LVELHYMRAI IKETFRLHPV VPLLVPRESI VACTLGGYDI PGKTRIFINT
401: FAMGRDPEIW EDPLEYWPER FEIAGGEIDL KDRDYKLMPF GGGRRGCPGY TFALPTVQLT LAKLMYHFEW ALPEGVRAED ISVEESFGLA TKKKEPLFVA
501: VRKSDMYEFK GE

Best Arabidopsis Sequence Match ( AT3G26300.1 )
(BLAST)

001: MTNIWLLSLI FVICILVAVF NHKNRRNYQR TPPSPPGCPI IGNLHQLGEL PHQSLWKLSK KYGPVMLLKL GRVPTVIVSS SETAKQALKI HDLHCCSRPG
101: FAGARELSYN YLDIAFSPYD DYWKEVRKLA VQELFSSKQV HSIQPIKDEE VKKLIDSISE SAAQKTPINL NKTLLALTVS VVCRTAFSVN FEGTVLNSER
201: FNNIVREALE MLGSFSASDF IPYVGRIIDL LTGLQGRRER SMRDLDAFYE QMFDLHKQKK EEGSEDFVDL LLRLEKEEAV LGNDKLTRNH IKAILMDVLL
301: AGMDTSAITM TWAMAELAKN PRVMKKVQSE IRSQIKNKER ISFDDTDKLE YLKMVIKETW RLHPTTPLLI PREAMSEFEI NGYTIPVKTR LHVNVWAIGR
401: DPDTWKDPEV FLPERFTDNN IDAKGQHFEL LPFGGGRRMC PAVYMGTTMV EFGLANLLYH FDWKLPEGMK VDDIDMEEAP GLTVNKKNEL ILVPTKFLDP

Arabidopsis Description

CYP71B34Cytochrome P450 71B34 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIP6]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.