Factsheet for VIT_17s0000g09610.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

cytosol 1
vacuole 5
extracellular 4
endoplasmic reticulum 6
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	golgi	57.59	64.75
Solyc09g014900.2.1	Tomato	endoplasmic reticulum	48.13	49.29
VIT_18s0001g13790.t01	Wine grape	endoplasmic reticulum, extracellular	46.75	47.88
VIT_01s0137g00540.t01	Wine grape	endoplasmic reticulum, extracellular	47.53	47.72
VIT_18s0001g13780.t01	Wine grape	cytosol	39.05	47.71
PGSC0003DMT400068437	Potato	endoplasmic reticulum	47.93	47.65
VIT_01s0137g00550.t01	Wine grape	endoplasmic reticulum, extracellular	46.94	47.13
VIT_18s0001g13770.t01	Wine grape	endoplasmic reticulum	45.76	46.77
VIT_01s0137g00560.t01	Wine grape	endoplasmic reticulum, extracellular	46.55	46.73
VIT_18s0001g13760.t01	Wine grape	cytosol	29.19	46.69
VIT_18s0001g13850.t01	Wine grape	cytosol	40.83	45.8
VIT_18s0001g13830.t01	Wine grape	extracellular, golgi	44.38	45.18
VIT_18s0001g13820.t01	Wine grape	extracellular, golgi	44.18	44.98
VIT_06s0004g06480.t01	Wine grape	extracellular, golgi	45.76	44.27
EES19131	Sorghum	endoplasmic reticulum	42.8	41.97
Zm00001d023625_P001	Maize	endoplasmic reticulum	43.2	41.63
Os12t0268000-01	Rice	plasma membrane	42.8	41.49
TraesCS4B01G396300.1	Wheat	endoplasmic reticulum	41.81	41.41
TraesCSU01G029900.1	Wheat	endoplasmic reticulum	41.81	41.25
TraesCS6D01G085100.1	Wheat	endoplasmic reticulum	42.21	41.23
TraesCS6A01G097400.1	Wheat	endoplasmic reticulum	42.01	41.04
TraesCS6B01G125800.1	Wheat	endoplasmic reticulum	41.81	40.69
TraesCS6B01G017000.1	Wheat	endoplasmic reticulum	41.42	40.31
VIT_06s0004g06460.t01	Wine grape	endoplasmic reticulum, golgi, plastid	41.42	39.55
TraesCS5A01G558100.1	Wheat	endoplasmic reticulum, golgi	24.85	39.13
Zm00001d048626_P001	Maize	endoplasmic reticulum, extracellular	33.92	37.97
VIT_01s0137g00510.t01	Wine grape	endoplasmic reticulum	39.84	31.08

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100265573	wikigene:100265573	MapMan:50.1.13	ProteinID:CCB42923	ProteinID:CCB42923.1
InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	UniProt:F6GTQ7	EMBL:FN594950
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0016705	GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0044550	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	EntrezGene:LOC100265573	wikigene:LOC100265573	PFAM:PF00067	PRINTS:PR00385
PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF92	SUPFAM:SSF48264	TMHMM:TMhelix
UniParc:UPI00015C87F0	ArrayExpress:VIT_17s0000g09610	EnsemblPlantsGene:VIT_17s0000g09610	EnsemblPlants:VIT_17s0000g09610.t01	RefSeq:XP_002276558	RefSeq:XP_002276558.2

Description

No Description!

Coordinates

chr17:+:11349860..11351636

Molecular Weight (calculated)

57839.7 Da

IEP (calculated)

7.500

GRAVY (calculated)

-0.041

Length

507 amino acids

Sequence
(BLAST)

001: MALLQWLKEG FLPSFLFAGI ILVAVLKFLQ KGMLRKRKFN LPPSPRKLPI IGNLHQLGNM PHISLHRLAQ KFGPIIFLQL GEVPTVVVSS ARVAKEVMKT
101: HDLALSSRPQ IFSAKHLFYD CTDIVFSPYS AYWRHLRKIC ILELLSAKRV QSFSFVREEE VARMVHRIAE SYPCPTNLTK ILGLYANDVL CRVAFGRDFS
201: AGGEYDRHGF QTMLEEYQVL LGGFSVGDFF PSMEFIHSLT GMKSRLQNTF RRFDHFFDEV VKEHLDPERK KEEHKDLVDV LLHVKEEGAT EMPLTMDNVK
301: AIILDMFAAG TDTTFITLDW GMTELIMNPK VMERAQAEVR SIVGERRVVT ESDLPQLHYM KAVIKEIFRL HPPAPVLVPR ESMEDVTIDG YNIPAKTRFF
401: VNAWAIGRDP ESWRNPESFE PQRFMGSTID FKGQDFELIP FGAGRRSCPA ITFGAATVEL ALAQLLHSFD WELPPGIQAQ DLDMTEVFGI TMHRIANLIV
501: LAKPRFP

Best Arabidopsis Sequence Match ( AT3G48280.1 )
(BLAST)

001: MMMMIILLWS IIFMTILFLK KQLSGKKGKT PPSPPGLPLI GNLHQLGRHT HRSLCDLSRR YGPLMLLHLG RVPVLIVSSA DMAQEILKTH DQAFANRPRS
101: KLSQKLLYNN RDVASAPYGE YWRQMKSVCV IHLLSNKMVR SFRDVREEEI TLMMAKIRKS SSLPFNVSKV LECLTNDVIC RVALGRKYGG ETDFKKLTDR
201: LSELLGTFSI GSFVPWLAWV DWIRGWDAQL DKMGKDLDDF FEKVVQDHED GDRRDGTDLI DALLRVKREK SPGFEIERVS IKAITLDVFV GGSDTSFTLL
301: EWAMTELLRH PKSLNRLQEE VRTICKGKSR VSEDDIQGMK YLKAVIKEAL RLHPPFPMMA PHESTEDVKL RDYHIPAGTQ VMMNAWAIGR EVATWGPDAE
401: EFKPERHLDT SVDFRGQNFE LLPFGAGRRI CPAVSFAVVL NEVVLANLVH GFDWKLPEES KEDKTDVAES SGFSVHREFP LYAVASPYLT

Arabidopsis Description

CYP71A25Cytochrome P450 71A25 [Source:UniProtKB/Swiss-Prot;Acc:Q9STK8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.