Factsheet for VIT_18s0001g13850.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 4
cytosol 2
endoplasmic reticulum 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g13820.t01	Wine grape	extracellular, golgi	92.48	83.94
VIT_18s0001g13830.t01	Wine grape	extracellular, golgi	90.71	82.33
VIT_18s0001g13780.t01	Wine grape	cytosol	66.15	72.05
VIT_18s0001g13760.t01	Wine grape	cytosol	48.23	68.77
VIT_18s0001g13790.t01	Wine grape	endoplasmic reticulum, extracellular	73.45	67.07
VIT_18s0001g13770.t01	Wine grape	endoplasmic reticulum	72.79	66.33
PGSC0003DMT400054278	Potato	cytosol	53.76	57.86
KRH65361	Soybean	peroxisome	50.44	57.58
PGSC0003DMT400080919	Potato	cytosol	43.58	57.27
KRH65371	Soybean	endoplasmic reticulum, golgi	63.05	56.77
KRH65375	Soybean	endoplasmic reticulum	62.39	56.06
KRH75322	Soybean	extracellular, golgi	61.73	55.69
KRH65363	Soybean	cytosol, golgi	58.63	55.56
Solyc09g092600.2.1	Tomato	endoplasmic reticulum	60.84	55.56
KRG98820	Soybean	endoplasmic reticulum, extracellular	61.06	55.09
KRH65370	Soybean	endoplasmic reticulum	60.4	54.71
Solyc09g092640.2.1	Tomato	endoplasmic reticulum, extracellular	59.29	54.58
PGSC0003DMT400080921	Potato	extracellular, golgi	58.85	54.18
Solyc09g092590.1.1	Tomato	endoplasmic reticulum	59.51	54.12
KRH65369	Soybean	endoplasmic reticulum	59.73	53.78
Solyc11g006590.1.1	Tomato	endoplasmic reticulum, extracellular	59.07	53.72
PGSC0003DMT400080925	Potato	endoplasmic reticulum	58.85	53.52
KRH65359	Soybean	mitochondrion	59.07	53.51
PGSC0003DMT400051239	Potato	cytosol	45.8	53.49
PGSC0003DMT400042825	Potato	extracellular, golgi	58.63	53.43
KRH65364	Soybean	endoplasmic reticulum	58.85	53.31
PGSC0003DMT400029453	Potato	cytosol, endoplasmic reticulum, plastid	55.97	53.15
PGSC0003DMT400068847	Potato	endoplasmic reticulum, vacuole	59.07	53.08
KRH65366	Soybean	endoplasmic reticulum	58.41	53.01
Solyc09g092620.2.1	Tomato	extracellular, golgi, vacuole	57.96	52.82
PGSC0003DMT400056301	Potato	extracellular, golgi	53.54	52.61
Solyc01g010490.2.1	Tomato	endoplasmic reticulum, extracellular	58.63	52.58
PGSC0003DMT400080928	Potato	extracellular, golgi, plasma membrane	57.3	52.22
Solyc09g092670.2.1	Tomato	endoplasmic reticulum, golgi	57.3	52.22
PGSC0003DMT400015433	Potato	endoplasmic reticulum, extracellular, plasma membrane	54.2	51.8
Solyc09g092560.2.1	Tomato	extracellular, golgi	51.33	51.33
PGSC0003DMT400056298	Potato	endoplasmic reticulum, golgi	46.02	50.73
Solyc09g092580.2.1	Tomato	endoplasmic reticulum, golgi	56.19	50.6
PGSC0003DMT400054280	Potato	extracellular, golgi, plasma membrane	51.33	50.33
GSMUA_Achr3P10540_001	Banana	endoplasmic reticulum, extracellular, mitochondrion	31.64	48.31
VIT_01s0137g00550.t01	Wine grape	endoplasmic reticulum, extracellular	53.1	47.52
VIT_01s0137g00560.t01	Wine grape	endoplasmic reticulum, extracellular	52.88	47.33
VIT_01s0137g00540.t01	Wine grape	endoplasmic reticulum, extracellular	52.88	47.33
VIT_06s0004g06480.t01	Wine grape	extracellular, golgi	50.22	43.32
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	36.73	43.23
GSMUA_Achr3P10550_001	Banana	extracellular, golgi	40.27	41.94
VIT_17s0000g09610.t01	Wine grape	endoplasmic reticulum, golgi	45.8	40.83
VIT_06s0004g06460.t01	Wine grape	endoplasmic reticulum, golgi, plastid	43.81	37.29
VIT_01s0137g00510.t01	Wine grape	endoplasmic reticulum	45.58	31.69

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	ProteinID:CCB46015	ProteinID:CCB46015.1	InterPro:Cyt_P450	InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	UniProt:F6H067	EMBL:FN595227	GO:GO:0003674	GO:GO:0003824
GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0016020	GO:GO:0016491	GO:GO:0016705	GO:GO:0016709	GO:GO:0019748
GO:GO:0020037	GO:GO:0044550	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF329	SUPFAM:SSF48264
UniParc:UPI0002109A67	ArrayExpress:VIT_18s0001g13850	EnsemblPlantsGene:VIT_18s0001g13850	EnsemblPlants:VIT_18s0001g13850.t01	RefSeq:XP_002280438	RefSeq:XP_002280438.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr18:-:11832431..11833905

Molecular Weight (calculated)

51593.9 Da

IEP (calculated)

7.578

GRAVY (calculated)

-0.187

Length

452 amino acids

Sequence
(BLAST)

001: MDNSAPHRYL WQLSKQYGPL MSLRLGFVPT IVVSSAKIAK EVMKTQDLEF ASRPSLIGQQ RLSYNGLDLA FSPYNDYWRE MRKICVLHLF TLKRVKSYTS
101: IREYEVSQMI EKISKLASAS KLINLSEALM FLTSTIICRV AFGKRYEGEG CERSRFHGLL NDAQAMLGSF FFSDHFPLMG WLDKLTGLTA RLEKTFREMD
201: LFYQEIIEEH LKPDRKKQEL EDITDVLIGL RKDNDFAIDI TWDHIKGVLM NIFLGGTDTG AATVTWAMTA LMKNPRVMKK AQEEVRNTFG KKGFIGEDDV
301: EKLPYLKAVV KETMRLLPSV PLLVPRETLQ KCSLDGYEIP PKTLVFVNAW AIGRDPEAWE NPEEFMPERF LGSSVDFRGQ HYKLIPFGAG RRVCPGLHIG
401: VVTVELTLAN LLHSFDWEMP AGMNEEDIDL DTIPGIAMHK KNALCLVAKK YN

Best Arabidopsis Sequence Match ( AT4G31500.1 )
(BLAST)

001: MDLLLIIAGL VAAAAFFFLR STTKKSLRLP PGPKGLPIIG NLHQMEKFNP QHFLFRLSKL YGPIFTMKIG GRRLAVISSA ELAKELLKTQ DLNFTARPLL
101: KGQQTMSYQG RELGFGQYTA YYREMRKMCM VNLFSPNRVA SFRPVREEEC QRMMDKIYKA ADQSGTVDLS ELLLSFTNCV VCRQAFGKRY NEYGTEMKRF
201: IDILYETQAL LGTLFFSDLF PYFGFLDNLT GLSARLKKAF KELDTYLQEL LDETLDPNRP KQETESFIDL LMQIYKDQPF SIKFTHENVK AMILDIVVPG
301: TDTAAAVVVW AMTYLIKYPE AMKKAQDEVR SVIGDKGYVS EEDIPNLPYL KAVIKESLRL EPVIPILLHR ETIADAKIGG YDIPAKTIIQ VNAWAVSRDT
401: AAWGDNPNEF IPERFMNEHK GVDFKGQDFE LLPFGSGRRM CPAMHLGIAM VEIPFANLLY KFDWSLPKGI KPEDIKMDVM TGLAMHKKEH LVLAPTKHI

Arabidopsis Description

CYP83B1Cytochrome P450 83B1 [Source:UniProtKB/Swiss-Prot;Acc:O65782]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.