Factsheet for VIT_18s0001g13770.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 3
endoplasmic reticulum 6
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g13780.t01	Wine grape	cytosol	74.4	88.92
VIT_18s0001g13790.t01	Wine grape	endoplasmic reticulum, extracellular	83.06	83.23
VIT_18s0001g13820.t01	Wine grape	extracellular, golgi	73.19	72.89
VIT_18s0001g13850.t01	Wine grape	cytosol	66.33	72.79
VIT_18s0001g13830.t01	Wine grape	extracellular, golgi	71.77	71.49
VIT_18s0001g13760.t01	Wine grape	cytosol	44.76	70.03
PGSC0003DMT400080919	Potato	cytosol	42.14	60.76
Solyc09g092600.2.1	Tomato	endoplasmic reticulum	59.27	59.39
KRH65375	Soybean	endoplasmic reticulum	59.88	59.05
KRH65371	Soybean	endoplasmic reticulum, golgi	59.48	58.76
KRH65364	Soybean	endoplasmic reticulum	58.87	58.52
PGSC0003DMT400080921	Potato	extracellular, golgi	57.46	58.04
PGSC0003DMT400054278	Potato	cytosol	48.59	57.38
Solyc09g092640.2.1	Tomato	endoplasmic reticulum, extracellular	56.65	57.23
KRH75322	Soybean	extracellular, golgi	57.66	57.09
KRH65363	Soybean	cytosol, golgi	54.64	56.81
Solyc11g006590.1.1	Tomato	endoplasmic reticulum, extracellular	56.85	56.74
KRH65370	Soybean	endoplasmic reticulum	57.06	56.71
KRH65369	Soybean	endoplasmic reticulum	57.26	56.57
PGSC0003DMT400056301	Potato	extracellular, golgi	52.42	56.52
KRG98820	Soybean	endoplasmic reticulum, extracellular	57.06	56.49
PGSC0003DMT400068847	Potato	endoplasmic reticulum, vacuole	57.26	56.46
PGSC0003DMT400029453	Potato	cytosol, endoplasmic reticulum, plastid	54.03	56.3
PGSC0003DMT400042825	Potato	extracellular, golgi	56.25	56.25
Solyc01g010490.2.1	Tomato	endoplasmic reticulum, extracellular	57.06	56.15
Solyc09g092560.2.1	Tomato	extracellular, golgi	51.01	55.97
Solyc09g092590.1.1	Tomato	endoplasmic reticulum	56.05	55.94
Solyc09g092670.2.1	Tomato	endoplasmic reticulum, golgi	55.85	55.85
PGSC0003DMT400080928	Potato	extracellular, golgi, plasma membrane	55.85	55.85
KRH65366	Soybean	endoplasmic reticulum	56.05	55.82
PGSC0003DMT400080925	Potato	endoplasmic reticulum	55.85	55.73
KRH65359	Soybean	mitochondrion	55.65	55.31
Solyc09g092620.2.1	Tomato	extracellular, golgi, vacuole	55.04	55.04
PGSC0003DMT400051239	Potato	cytosol	42.94	55.04
KRH65361	Soybean	peroxisome	43.75	54.8
Solyc09g092580.2.1	Tomato	endoplasmic reticulum, golgi	54.23	53.59
PGSC0003DMT400054280	Potato	extracellular, golgi, plasma membrane	49.8	53.58
PGSC0003DMT400015433	Potato	endoplasmic reticulum, extracellular, plasma membrane	51.01	53.49
PGSC0003DMT400056298	Potato	endoplasmic reticulum, golgi	43.95	53.17
GSMUA_Achr3P10540_001	Banana	endoplasmic reticulum, extracellular, mitochondrion	29.64	49.66
VIT_01s0137g00540.t01	Wine grape	endoplasmic reticulum, extracellular	49.6	48.71
VIT_01s0137g00560.t01	Wine grape	endoplasmic reticulum, extracellular	49.6	48.71
VIT_01s0137g00550.t01	Wine grape	endoplasmic reticulum, extracellular	48.39	47.52
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	36.69	47.4
GSMUA_Achr3P10550_001	Banana	extracellular, golgi	41.13	47.0
VIT_17s0000g09610.t01	Wine grape	endoplasmic reticulum, golgi	46.77	45.76
VIT_06s0004g06480.t01	Wine grape	extracellular, golgi	47.38	44.85
VIT_06s0004g06460.t01	Wine grape	endoplasmic reticulum, golgi, plastid	42.34	39.55
VIT_01s0137g00510.t01	Wine grape	endoplasmic reticulum	43.15	32.92

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100250687	wikigene:100250687	MapMan:50.1.13	EMBL:AM489206	ProteinID:CAN71113
ProteinID:CAN71113.1	ProteinID:CCB46010	ProteinID:CCB46010.1	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	UniProt:F6GZR8	EMBL:FN595227	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016020	GO:GO:0016491	GO:GO:0016705	GO:GO:0016709	GO:GO:0019748	GO:GO:0020037
GO:GO:0044550	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	EntrezGene:LOC100250687	wikigene:LOC100250687
PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF329
SUPFAM:SSF48264	SignalP:SignalP-noTM	TIGR:TC61438	UniParc:UPI000198525B	ArrayExpress:VIT_18s0001g13770	EnsemblPlantsGene:VIT_18s0001g13770
EnsemblPlants:VIT_18s0001g13770.t01	unigene:Vvi.1621	RefSeq:XP_002278372	RefSeq:XP_002278372.1	SEG:seg	:

Description

No Description!

Coordinates

chr18:-:11767560..11769317

Molecular Weight (calculated)

56463.4 Da

IEP (calculated)

7.371

GRAVY (calculated)

-0.030

Length

496 amino acids

Sequence
(BLAST)

001: MILHLILLAL PLFLLFLVRN HRNNGRTPLP PGPPGLPFIG NLLQISKTAP HLYLWQLSKQ YGSLMFLRLG FVPTLVVSSA RMAKEVMKTH DLEFSGRPSM
101: LGLKKLTYNG LSLSVAPSND YWREMRKVCA LHLFNSKRVQ SFRHIREDEV LETVKKISKF ASASKLTNLS EILILLTSTI ICRVAFGKRY DDEGCERSRF
201: HELLGGVQTM SMAFFFSDHF PLMGWVDKLT GMIARLEKIF EELDLFCQEI IDEHLDPNRS KLEQEDITDV LLRLQKDRSS TVDLTWDHIK AMFVDIFVAG
301: TDTSAATVVW AMTELMKNPI VMKKAQEELR NLIGKKGFVD EDDLQKLSYL KALVKETMRL HPAAPLLVPR ETLEKCVIDG YEIAPKTLVF VNAWAIGRDP
401: EFWENPEEFM PERFLGSSID FKGQDYQLIP FGGGRRVCPG LLLGAVMVEL TLANLLYSFD WEMPAGMNKE DIDTDVKPGI TMHKKNALCL LARSHI

Best Arabidopsis Sequence Match ( AT4G31500.1 )
(BLAST)

001: MDLLLIIAGL VAAAAFFFLR STTKKSLRLP PGPKGLPIIG NLHQMEKFNP QHFLFRLSKL YGPIFTMKIG GRRLAVISSA ELAKELLKTQ DLNFTARPLL
101: KGQQTMSYQG RELGFGQYTA YYREMRKMCM VNLFSPNRVA SFRPVREEEC QRMMDKIYKA ADQSGTVDLS ELLLSFTNCV VCRQAFGKRY NEYGTEMKRF
201: IDILYETQAL LGTLFFSDLF PYFGFLDNLT GLSARLKKAF KELDTYLQEL LDETLDPNRP KQETESFIDL LMQIYKDQPF SIKFTHENVK AMILDIVVPG
301: TDTAAAVVVW AMTYLIKYPE AMKKAQDEVR SVIGDKGYVS EEDIPNLPYL KAVIKESLRL EPVIPILLHR ETIADAKIGG YDIPAKTIIQ VNAWAVSRDT
401: AAWGDNPNEF IPERFMNEHK GVDFKGQDFE LLPFGSGRRM CPAMHLGIAM VEIPFANLLY KFDWSLPKGI KPEDIKMDVM TGLAMHKKEH LVLAPTKHI

Arabidopsis Description

CYP83B1Cytochrome P450 83B1 [Source:UniProtKB/Swiss-Prot;Acc:O65782]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.