Factsheet for VIT_18s0001g13760.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 3
plastid 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g13780.t01	Wine grape	cytosol	69.72	53.25
VIT_18s0001g13850.t01	Wine grape	cytosol	68.77	48.23
VIT_18s0001g13820.t01	Wine grape	extracellular, golgi	70.66	44.98
VIT_18s0001g13830.t01	Wine grape	extracellular, golgi	70.35	44.78
VIT_18s0001g13770.t01	Wine grape	endoplasmic reticulum	70.03	44.76
VIT_18s0001g13790.t01	Wine grape	endoplasmic reticulum, extracellular	67.82	43.43
PGSC0003DMT400080919	Potato	cytosol	47.0	43.31
PGSC0003DMT400054278	Potato	cytosol	50.47	38.1
KRH65371	Soybean	endoplasmic reticulum, golgi	58.99	37.25
GSMUA_Achr3P10540_001	Banana	endoplasmic reticulum, extracellular, mitochondrion	34.38	36.82
Solyc09g092600.2.1	Tomato	endoplasmic reticulum	57.41	36.77
KRH65363	Soybean	cytosol, golgi	54.89	36.48
KRH65370	Soybean	endoplasmic reticulum	57.1	36.27
KRH65364	Soybean	endoplasmic reticulum	57.1	36.27
KRH65369	Soybean	endoplasmic reticulum	57.41	36.26
Solyc09g092640.2.1	Tomato	endoplasmic reticulum, extracellular	56.15	36.25
KRH65375	Soybean	endoplasmic reticulum	57.41	36.18
PGSC0003DMT400051239	Potato	cytosol	44.16	36.18
PGSC0003DMT400068847	Potato	endoplasmic reticulum, vacuole	57.1	35.98
Solyc01g010490.2.1	Tomato	endoplasmic reticulum, extracellular	57.1	35.91
KRH65366	Soybean	endoplasmic reticulum	55.84	35.54
PGSC0003DMT400080921	Potato	extracellular, golgi	54.89	35.44
KRH65361	Soybean	peroxisome	43.53	34.85
Solyc11g006590.1.1	Tomato	endoplasmic reticulum, extracellular	54.57	34.81
PGSC0003DMT400042825	Potato	extracellular, golgi	54.26	34.68
Solyc09g092590.1.1	Tomato	endoplasmic reticulum	54.26	34.61
Solyc09g092670.2.1	Tomato	endoplasmic reticulum, golgi	53.94	34.48
KRH75322	Soybean	extracellular, golgi	54.26	34.33
PGSC0003DMT400054280	Potato	extracellular, golgi, plasma membrane	49.53	34.06
PGSC0003DMT400029453	Potato	cytosol, endoplasmic reticulum, plastid	51.1	34.03
KRG98820	Soybean	endoplasmic reticulum, extracellular	53.63	33.93
Solyc09g092620.2.1	Tomato	extracellular, golgi, vacuole	53.0	33.87
PGSC0003DMT400080928	Potato	extracellular, golgi, plasma membrane	53.0	33.87
KRH65359	Soybean	mitochondrion	53.31	33.87
VIT_01s0137g00540.t01	Wine grape	endoplasmic reticulum, extracellular	53.94	33.86
VIT_01s0137g00550.t01	Wine grape	endoplasmic reticulum, extracellular	53.63	33.66
PGSC0003DMT400056301	Potato	extracellular, golgi	48.58	33.48
Solyc09g092560.2.1	Tomato	extracellular, golgi	47.63	33.41
PGSC0003DMT400080925	Potato	endoplasmic reticulum	52.37	33.4
VIT_01s0137g00560.t01	Wine grape	endoplasmic reticulum, extracellular	53.0	33.27
PGSC0003DMT400015433	Potato	endoplasmic reticulum, extracellular, plasma membrane	49.53	33.19
PGSC0003DMT400056298	Potato	endoplasmic reticulum, golgi	42.59	32.93
Solyc09g092580.2.1	Tomato	endoplasmic reticulum, golgi	51.73	32.67
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	37.54	30.99
GSMUA_Achr3P10550_001	Banana	extracellular, golgi	41.01	29.95
VIT_06s0004g06480.t01	Wine grape	extracellular, golgi	48.27	29.2
VIT_17s0000g09610.t01	Wine grape	endoplasmic reticulum, golgi	46.69	29.19
VIT_01s0137g00510.t01	Wine grape	endoplasmic reticulum	51.1	24.92
VIT_06s0004g06460.t01	Wine grape	endoplasmic reticulum, golgi, plastid	41.64	24.86

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	ProteinID:CCB46009	ProteinID:CCB46009.1	InterPro:Cyt_P450	InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	UniProt:F6GZR7	EMBL:FN595227	GO:GO:0003674	GO:GO:0003824
GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0016020	GO:GO:0016491	GO:GO:0016705	GO:GO:0016709	GO:GO:0019748
GO:GO:0020037	GO:GO:0044550	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF329	SUPFAM:SSF48264
UniParc:UPI0002109A65	ArrayExpress:VIT_18s0001g13760	EnsemblPlantsGene:VIT_18s0001g13760	EnsemblPlants:VIT_18s0001g13760.t01	:	:

Description

No Description!

Coordinates

chr18:-:11761760..11763067

Molecular Weight (calculated)

36053.5 Da

IEP (calculated)

6.410

GRAVY (calculated)

-0.167

Length

317 amino acids

Sequence
(BLAST)

001: MAWIWIFAPY DGYWREMRKI CVLHPFSSKR VQSFRSIRED EVSRIIEKIS KSASAAKLTD LSETVMLLTS NIICRTAFGK RYEDKGYDRS RFHGLLNDAQ
101: AMMGSFFFTD HFPSMGPKQE QEDIAVVLLR LQRERLFSVD LTWDHIKAVL MDVFVAGTDP GAATLVWAMA EVTKNPGGKK KAQEELRTVF GRKGFVDEDD
201: LHKLPYLKAL VKETLRVHPP APLLLTKETL ENCTIDAYDI PPKTLVFVNA WAIGRDPEAW ENPEEILPER FLSSSVDFKG QDYELISFSV GRRGCPGIHL
301: GVVTVELALA NLLYSFD

Best Arabidopsis Sequence Match ( AT1G13080.1 )
(BLAST)

001: MTILLCFFLV SLLTIVSSIF LKQNKTSKFN LPPSPSSLPI IGNLHHLAGL PHRCFHKLSI KYGPLVFLRL GSVPVVVISS SEAAEAVLKT NDLECCSRPK
101: TVGSGKLSYG FKDITFAPYG EYWREVRKLA VIELFSSKKV QSFRYIREEE VDFVVKKVSE SALKQSPVDL SKTFFSLTAS IICRVALGQN FNESGFVIDQ
201: DRIEELVTES AEALGTFTFS DFFPGGLGRF VDWLFQRHKK INKVFKELDA FYQHVIDDHL KPEGRKNQDI VTLILDMIDK QEDSDSFKLN MDNLKAIVMD
301: VFLAGIDTSA VTMIWAMTEL IRNPRVMKKA QESIRTTLGL KKERITEEDL GKVEYLNHIL KETFRLHPAL PFVVPRETMS HIKIQGYDIP PKTQIQLNVW
401: TIGRDPKRWN DPEEFNPERF ANSSVDFRGQ HFDLLPFGSG RRICPGMPMA IASVELALMN LLYYFDWSMP DGTKGEDIDM EEAGNISIVK KIPLQLVPVQ
501: RY

Arabidopsis Description

CYP71B2Cytochrome P450 71B2 [Source:UniProtKB/Swiss-Prot;Acc:O65788]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.