Factsheet for VIT_18s0001g13820.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g13830.t01	Wine grape	extracellular, golgi	96.39	96.39
VIT_18s0001g13850.t01	Wine grape	cytosol	83.94	92.48
VIT_18s0001g13770.t01	Wine grape	endoplasmic reticulum	72.89	73.19
VIT_18s0001g13790.t01	Wine grape	endoplasmic reticulum, extracellular	72.29	72.73
VIT_18s0001g13780.t01	Wine grape	cytosol	60.44	72.53
VIT_18s0001g13760.t01	Wine grape	cytosol	44.98	70.66
KRH65371	Soybean	endoplasmic reticulum, golgi	61.04	60.56
KRH75322	Soybean	extracellular, golgi	60.64	60.28
KRH65375	Soybean	endoplasmic reticulum	60.84	60.24
KRG98820	Soybean	endoplasmic reticulum, extracellular	60.44	60.08
PGSC0003DMT400080919	Potato	cytosol	41.37	59.88
Solyc09g092640.2.1	Tomato	endoplasmic reticulum, extracellular	59.04	59.88
PGSC0003DMT400080921	Potato	extracellular, golgi	58.84	59.67
PGSC0003DMT400054278	Potato	cytosol	49.6	58.81
Solyc09g092600.2.1	Tomato	endoplasmic reticulum	58.43	58.79
KRH65363	Soybean	cytosol, golgi	56.22	58.7
KRH65370	Soybean	endoplasmic reticulum	58.63	58.52
PGSC0003DMT400042825	Potato	extracellular, golgi	58.23	58.47
PGSC0003DMT400080925	Potato	endoplasmic reticulum	57.83	57.95
KRH65369	Soybean	endoplasmic reticulum	58.23	57.77
KRH65364	Soybean	endoplasmic reticulum	57.83	57.72
Solyc09g092620.2.1	Tomato	extracellular, golgi, vacuole	57.43	57.66
KRH65359	Soybean	mitochondrion	57.63	57.52
PGSC0003DMT400056301	Potato	extracellular, golgi	53.01	57.39
Solyc09g092590.1.1	Tomato	endoplasmic reticulum	57.23	57.34
KRH65361	Soybean	peroxisome	45.58	57.32
PGSC0003DMT400068847	Potato	endoplasmic reticulum, vacuole	57.63	57.06
Solyc11g006590.1.1	Tomato	endoplasmic reticulum, extracellular	56.83	56.94
KRH65366	Soybean	endoplasmic reticulum	56.63	56.63
Solyc01g010490.2.1	Tomato	endoplasmic reticulum, extracellular	57.23	56.55
PGSC0003DMT400080928	Potato	extracellular, golgi, plasma membrane	56.22	56.45
PGSC0003DMT400029453	Potato	cytosol, endoplasmic reticulum, plastid	53.82	56.3
Solyc09g092670.2.1	Tomato	endoplasmic reticulum, golgi	56.02	56.25
Solyc09g092580.2.1	Tomato	endoplasmic reticulum, golgi	56.22	55.78
Solyc09g092560.2.1	Tomato	extracellular, golgi	50.4	55.53
PGSC0003DMT400015433	Potato	endoplasmic reticulum, extracellular, plasma membrane	52.61	55.39
PGSC0003DMT400051239	Potato	cytosol	42.97	55.3
PGSC0003DMT400054280	Potato	extracellular, golgi, plasma membrane	50.6	54.66
PGSC0003DMT400056298	Potato	endoplasmic reticulum, golgi	44.98	54.63
VIT_01s0137g00540.t01	Wine grape	endoplasmic reticulum, extracellular	52.01	51.29
VIT_01s0137g00560.t01	Wine grape	endoplasmic reticulum, extracellular	52.01	51.29
VIT_01s0137g00550.t01	Wine grape	endoplasmic reticulum, extracellular	51.41	50.69
GSMUA_Achr3P10540_001	Banana	endoplasmic reticulum, extracellular, mitochondrion	29.92	50.34
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	37.35	48.44
VIT_06s0004g06480.t01	Wine grape	extracellular, golgi	50.2	47.71
GSMUA_Achr3P10550_001	Banana	extracellular, golgi	40.96	47.0
VIT_17s0000g09610.t01	Wine grape	endoplasmic reticulum, golgi	44.98	44.18
VIT_06s0004g06460.t01	Wine grape	endoplasmic reticulum, golgi, plastid	42.97	40.3
VIT_01s0137g00510.t01	Wine grape	endoplasmic reticulum	44.98	34.46

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100245351	wikigene:100245351	EntrezGene:100260959	wikigene:100260959	MapMan:50.1.13
UniProt:A5CBQ0	EMBL:AM489237	ProteinID:CAN64422	ProteinID:CAN64422.1	ProteinID:CCB46013	ProteinID:CCB46013.1
ncoils:Coil	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	EMBL:FN595227
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016491	GO:GO:0016705
GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0044550	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	EntrezGene:LOC100245351	wikigene:LOC100245351	EntrezGene:LOC100260959	wikigene:LOC100260959	PFAM:PF00067
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF329	SUPFAM:SSF48264
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001522BB1	ArrayExpress:VIT_18s0001g13820	EnsemblPlantsGene:VIT_18s0001g13820	EnsemblPlants:VIT_18s0001g13820.t01
RefSeq:XP_002280472	RefSeq:XP_002280472.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr18:-:11794593..11796161

Molecular Weight (calculated)

56939.8 Da

IEP (calculated)

8.707

GRAVY (calculated)

-0.099

Length

498 amino acids

Sequence
(BLAST)

001: MTVLLFVILA FPLLLLFLHR KHRKNGGLLH LPPGPPGLPF IGNLHQMDNS ARHRYLWQLS KQYGSLMSLR LGFIPTIVVS SARIAKEVMK THDLEFASRP
101: SLIGPQRLSY NCLDLAFSPY NDYWREMRKI CVLHLFTLKR VQSYTPIREY EVSQMIEKIS KLASASKLIN LSETLMFLTS TIICRVAFGK RYEDEGFERS
201: RFHGLLNDAQ AMLGSFFFSD HFPLIGWLDK LTGLTARLEK TFRDMDLFYQ EIIEDHLKPD RKKQEQEDIT DVLIGLQKDN SFAIDITWDH IKGVLMNIFV
301: GGTDTGAATV IWAMTALMKN PRVMKKAQEE VRNTFGKKGF IGEDDVEKLP YLKAVVKETM RLLPAVPLLI PRETLQKCSI DGYEIPPKTL VFVNAWAIGR
401: DPEAWENPEE FIPERFLGSS VDFRGQNYKL IPFGAGRRVC PGIHIGAVTV ELTLANLLYS FDWEMPAGMN KEDIDFDVIP GLTMHKKNAL CLMAKKYN

Best Arabidopsis Sequence Match ( AT4G31500.1 )
(BLAST)

001: MDLLLIIAGL VAAAAFFFLR STTKKSLRLP PGPKGLPIIG NLHQMEKFNP QHFLFRLSKL YGPIFTMKIG GRRLAVISSA ELAKELLKTQ DLNFTARPLL
101: KGQQTMSYQG RELGFGQYTA YYREMRKMCM VNLFSPNRVA SFRPVREEEC QRMMDKIYKA ADQSGTVDLS ELLLSFTNCV VCRQAFGKRY NEYGTEMKRF
201: IDILYETQAL LGTLFFSDLF PYFGFLDNLT GLSARLKKAF KELDTYLQEL LDETLDPNRP KQETESFIDL LMQIYKDQPF SIKFTHENVK AMILDIVVPG
301: TDTAAAVVVW AMTYLIKYPE AMKKAQDEVR SVIGDKGYVS EEDIPNLPYL KAVIKESLRL EPVIPILLHR ETIADAKIGG YDIPAKTIIQ VNAWAVSRDT
401: AAWGDNPNEF IPERFMNEHK GVDFKGQDFE LLPFGSGRRM CPAMHLGIAM VEIPFANLLY KFDWSLPKGI KPEDIKMDVM TGLAMHKKEH LVLAPTKHI

Arabidopsis Description

CYP83B1Cytochrome P450 83B1 [Source:UniProtKB/Swiss-Prot;Acc:O65782]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.