Factsheet for VIT_18s0001g13780.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g13770.t01	Wine grape	endoplasmic reticulum	88.92	74.4
VIT_18s0001g13760.t01	Wine grape	cytosol	53.25	69.72
VIT_18s0001g13790.t01	Wine grape	endoplasmic reticulum, extracellular	82.89	69.49
VIT_18s0001g13850.t01	Wine grape	cytosol	72.05	66.15
VIT_18s0001g13820.t01	Wine grape	extracellular, golgi	72.53	60.44
PGSC0003DMT400080919	Potato	cytosol	49.4	59.59
VIT_18s0001g13830.t01	Wine grape	extracellular, golgi	71.08	59.24
PGSC0003DMT400054278	Potato	cytosol	58.07	57.38
PGSC0003DMT400051239	Potato	cytosol	52.77	56.59
KRH65361	Soybean	peroxisome	52.29	54.8
Solyc09g092600.2.1	Tomato	endoplasmic reticulum	64.34	53.94
KRH65371	Soybean	endoplasmic reticulum, golgi	63.37	52.39
KRH65375	Soybean	endoplasmic reticulum	62.65	51.69
PGSC0003DMT400080921	Potato	extracellular, golgi	60.96	51.53
KRH65364	Soybean	endoplasmic reticulum	61.69	51.3
Solyc11g006590.1.1	Tomato	endoplasmic reticulum, extracellular	61.2	51.11
PGSC0003DMT400029453	Potato	cytosol, endoplasmic reticulum, plastid	58.55	51.05
KRH65363	Soybean	cytosol, golgi	58.55	50.94
Solyc09g092640.2.1	Tomato	endoplasmic reticulum, extracellular	60.24	50.92
Solyc09g092590.1.1	Tomato	endoplasmic reticulum	60.48	50.5
GSMUA_Achr3P10540_001	Banana	endoplasmic reticulum, extracellular, mitochondrion	35.9	50.34
Solyc01g010490.2.1	Tomato	endoplasmic reticulum, extracellular	60.48	49.8
PGSC0003DMT400068847	Potato	endoplasmic reticulum, vacuole	60.24	49.7
PGSC0003DMT400080928	Potato	extracellular, golgi, plasma membrane	59.28	49.6
PGSC0003DMT400042825	Potato	extracellular, golgi	59.28	49.6
KRH75322	Soybean	extracellular, golgi	59.76	49.5
PGSC0003DMT400080925	Potato	endoplasmic reticulum	59.28	49.5
Solyc09g092670.2.1	Tomato	endoplasmic reticulum, golgi	59.04	49.4
PGSC0003DMT400056301	Potato	extracellular, golgi	54.7	49.35
Solyc09g092560.2.1	Tomato	extracellular, golgi	53.73	49.34
KRH65369	Soybean	endoplasmic reticulum	59.52	49.2
Solyc09g092620.2.1	Tomato	extracellular, golgi, vacuole	58.55	48.99
KRH65370	Soybean	endoplasmic reticulum	58.8	48.9
KRH65359	Soybean	mitochondrion	58.55	48.7
KRG98820	Soybean	endoplasmic reticulum, extracellular	58.55	48.5
KRH65366	Soybean	endoplasmic reticulum	58.07	48.39
Solyc09g092580.2.1	Tomato	endoplasmic reticulum, golgi	57.83	47.81
PGSC0003DMT400015433	Potato	endoplasmic reticulum, extracellular, plasma membrane	54.22	47.57
PGSC0003DMT400054280	Potato	extracellular, golgi, plasma membrane	51.33	46.2
PGSC0003DMT400056298	Potato	endoplasmic reticulum, golgi	45.54	46.1
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	39.28	42.45
VIT_01s0137g00540.t01	Wine grape	endoplasmic reticulum, extracellular	49.88	40.99
VIT_01s0137g00550.t01	Wine grape	endoplasmic reticulum, extracellular	49.88	40.99
VIT_01s0137g00560.t01	Wine grape	endoplasmic reticulum, extracellular	49.64	40.79
GSMUA_Achr3P10550_001	Banana	extracellular, golgi	41.69	39.86
VIT_17s0000g09610.t01	Wine grape	endoplasmic reticulum, golgi	47.71	39.05
VIT_06s0004g06480.t01	Wine grape	extracellular, golgi	49.16	38.93
VIT_06s0004g06460.t01	Wine grape	endoplasmic reticulum, golgi, plastid	42.65	33.33
VIT_01s0137g00510.t01	Wine grape	endoplasmic reticulum	48.19	30.77

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	ProteinID:CCB46011	ProteinID:CCB46011.1	InterPro:Cyt_P450	InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	UniProt:F6GZR9	EMBL:FN595227	GO:GO:0003674	GO:GO:0003824
GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0016020	GO:GO:0016491	GO:GO:0016705	GO:GO:0016709	GO:GO:0019748
GO:GO:0020037	GO:GO:0044550	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF329	SUPFAM:SSF48264
UniParc:UPI0002109A66	ArrayExpress:VIT_18s0001g13780	EnsemblPlantsGene:VIT_18s0001g13780	EnsemblPlants:VIT_18s0001g13780.t01	RefSeq:XP_002278387	RefSeq:XP_002278387.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr18:-:11774368..11775896

Molecular Weight (calculated)

47721.1 Da

IEP (calculated)

5.724

GRAVY (calculated)

-0.167

Length

415 amino acids

Sequence
(BLAST)

001: MAKEVMKTHD LEFSGRPSLL GQQKLFYNGL GLTFTPYNDY WREMRKICVL HLFNSKRVQS FRYIREDEVL EMIKKISKFA SASKLTNLSE ILIPLTSTII
101: CRVAFGKRYD DEGCERSRFH ELLGGIQTMA IAFFFSDYFP LMSWVDKLTG MISRLEKVSE ELDLFCQKII DEHLDPNKPM PEQEDITDIL LRLQKDRSFT
201: VDLTWDHIKA ILMDIFIAGT DTSAATLVWA MTELMKNPIV MKKAQEEFRN SIGKKGFVDE DDLQMLCYLK ALVKETMRLH PAAPLLVPRE TREKCVIDGY
301: EIAPKTLVFV NAWAIGRDPE FWENPEEFMP ERFLGSSIDF KGQDYQFIPF GGGRRACPGS LLGVVMVELT LANLLYSFDW EMPAGMNKED IDTDVKPGIT
401: VHKKNALCLL ARSHT

Best Arabidopsis Sequence Match ( AT3G26320.1 )
(BLAST)

001: MATILFLSLL FLSCILLAAF THKKRQQHQR KPPSPPGFPI IGNLHQLGEL PHQSLWRLSK KYGHVMLLKF GSIPTVVVSS SETAKQVLKI HDLHCCSRPS
101: LAGPRALSYN YLDIAFSPFD DYWKELRRIC VQELFSVKRV QSFQPIKEDE VKKLIDSVSE SASQGTPVNL SEKFTSLTVR VTCKATFGVN FQGTVLNSDR
201: FEKLIHDTYL FLGSFSASDY FPNGGWIIDW LTGLHGQRER SVRALDAFYE QMFDLHKQGN KEGVEDFVDL LLRLEKEETV IGYGKLTRNH IKAILMNVLI
301: GGIGTSAITM TWAMTELMRN PRVMKKVQSE IRNQIGKKSM ITLDDIDQLH YLKMVINETW RLHPPSPFLI PRQVMSEFEL NDYVIPVKTR LYVNVWAIGR
401: DPDTWKDPEE FLPERFVNSS IDAKGQHFEL LPFGSGRRMC PAMYMGTTMV EFGLANMLYH FDWKIPVGMV AEDIDLEESP GLNASKKNEL VLVPLKYLDH

Arabidopsis Description

CYP71B36Cytochrome P450 71B36 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIP4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.