Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- endoplasmic reticulum 1
- mitochondrion 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G050200.1 | Wheat | extracellular | 64.21 | 71.76 |
| TraesCS5D01G050100.1 | Wheat | extracellular | 58.95 | 69.14 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G049200.1 | EnsemblPlantsGene:TraesCS5D01G049200 | PFAM:PD865005 | SEG:seg | TMHMM:TMhelix | MapMan:35.2 |
Description
No Description!
Coordinates
chr5D:+:46980668..46981076
Molecular Weight (calculated)
9649.8 Da
IEP (calculated)
10.049
GRAVY (calculated)
0.162
Length
95 amino acids
Sequence
(BLAST)
(BLAST)
1: MALQAPIINM ASLGSRAAGR RRPTVLQQIA LFVVIAAVIM NSSVCVGAAG HDAAVVGTDP NHPAFPSPPG KPYTGGRGCR TIYGCRDVPP AGGQP
001: MDAEKATDKT NVHLSSDHER CPVEEVALVV PETDDPSLPV MTFRAWFLGL TSCVLLIFLN TFFTYRTQPL TISAILMQIA VLPIGKFMAR TLPTTSHNLL
101: GWSFSLNPGP FNIKEHVIIT IFANCGVAYG GGDAYSIGAI TVMKAYYKQS LSFICGLFIV LTTQILGYGW AGILRRYLVD PVDMWWPSNL AQVSLFRALH
201: EKENKSKGLT RMKFFLVALG ASFIYYALPG YLFPILTFFS WVCWAWPNSI TAQQVGSGYH GLGVGAFTLD WAGISAYHGS PLVAPWSSIL NVGVGFIMFI
301: YIIVPVCYWK FNTFDARKFP IFSNQLFTTS GQKYDTTKIL TPQFDLDIGA YNNYGKLYLS PLFALSIGSG FARFTATLTH VALFNGRDIW KQTWSAVNTT
401: KLDIHGKLMQ SYKKVPEWWF YILLAGSVAM SLLMSFVWKE SVQLPWWGML FAFALAFIVT LPIGVIQATT NQQPGYDIIG QFIIGYILPG KPIANLIFKI
501: YGRISTVHAL SFLADLKLGH YMKIPPRCMY TAQLVGTVVA GVVNLGVAWW MLESIQDICD IEGDHPNSPW TCPKYRVTFD ASVIWGLIGP RRLFGPGGMY
601: RNLVGLFLIG AVLPVPVWAL SKIFPNKKWI PLINIPVISY GFAGMPPATP TNIASWLVTG TIFNYFVFNY HKRWWQKYNY VLSAALDAGT AFMGVLLFFA
701: LQNAGHDLKW WGTEVDHCPL ASCPTAPGIK AKGCPVF
101: GWSFSLNPGP FNIKEHVIIT IFANCGVAYG GGDAYSIGAI TVMKAYYKQS LSFICGLFIV LTTQILGYGW AGILRRYLVD PVDMWWPSNL AQVSLFRALH
201: EKENKSKGLT RMKFFLVALG ASFIYYALPG YLFPILTFFS WVCWAWPNSI TAQQVGSGYH GLGVGAFTLD WAGISAYHGS PLVAPWSSIL NVGVGFIMFI
301: YIIVPVCYWK FNTFDARKFP IFSNQLFTTS GQKYDTTKIL TPQFDLDIGA YNNYGKLYLS PLFALSIGSG FARFTATLTH VALFNGRDIW KQTWSAVNTT
401: KLDIHGKLMQ SYKKVPEWWF YILLAGSVAM SLLMSFVWKE SVQLPWWGML FAFALAFIVT LPIGVIQATT NQQPGYDIIG QFIIGYILPG KPIANLIFKI
501: YGRISTVHAL SFLADLKLGH YMKIPPRCMY TAQLVGTVVA GVVNLGVAWW MLESIQDICD IEGDHPNSPW TCPKYRVTFD ASVIWGLIGP RRLFGPGGMY
601: RNLVGLFLIG AVLPVPVWAL SKIFPNKKWI PLINIPVISY GFAGMPPATP TNIASWLVTG TIFNYFVFNY HKRWWQKYNY VLSAALDAGT AFMGVLLFFA
701: LQNAGHDLKW WGTEVDHCPL ASCPTAPGIK AKGCPVF
Arabidopsis Description
ATOPT3oligopeptide transporter [Source:TAIR;Acc:AT4G16370]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.