Factsheet for TraesCS5D01G422300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G413900.1	Wheat	cytosol	30.03	96.4
TraesCS5B01G417000.1	Wheat	cytosol	93.83	89.79
HORVU2Hr1G118390.26	Barley	plastid	19.46	61.72
TraesCS2D01G025000.1	Wheat	cytosol	14.41	59.23
TraesCS5D01G502300.1	Wheat	cytosol	14.03	56.6
TraesCS7D01G487900.1	Wheat	cytosol	25.16	54.12
TraesCS2D01G019800.1	Wheat	cytosol	11.32	53.78
TraesCS1D01G077800.1	Wheat	cytosol	9.26	53.51
TraesCS5D01G422600.1	Wheat	cytosol	25.07	53.17
TraesCS3D01G030400.1	Wheat	cytosol	9.82	52.76
TraesCS7D01G486900.4	Wheat	cytosol	30.68	46.2
TraesCS4D01G089600.1	Wheat	cytosol	13.1	43.61
TraesCS4D01G089100.1	Wheat	cytosol	12.91	43.53
TraesCS2D01G026500.1	Wheat	cytosol	13.66	42.94
TraesCS7D01G361600.1	Wheat	cytosol	13.1	42.17
TraesCS4D01G089200.2	Wheat	cytosol	12.82	42.15
TraesCS7D01G005800.2	Wheat	cytosol	13.56	41.19
TraesCS7D01G526800.1	Wheat	cytosol	13.28	39.89
TraesCS2D01G203200.1	Wheat	cytosol	11.88	39.44
TraesCS5D01G299800.1	Wheat	cytosol	12.82	39.26
TraesCS2D01G024700.1	Wheat	cytosol	17.68	38.03
TraesCS2D01G025500.1	Wheat	mitochondrion	12.91	36.6
TraesCS7D01G525000.1	Wheat	nucleus	11.79	34.9
TraesCS7D01G005900.1	Wheat	cytosol	5.99	34.78
TraesCS2D01G019600.2	Wheat	cytosol	20.3	34.44
TraesCS7D01G526200.1	Wheat	cytosol	11.41	34.17
TraesCS7D01G527100.1	Wheat	cytosol	9.73	33.66
TraesCS7D01G000700.1	Wheat	cytosol	14.59	33.62
TraesCS2D01G057700.1	Wheat	cytosol	14.13	33.26
TraesCS2D01G024900.1	Wheat	cytosol	14.13	33.19
TraesCS5D01G543500.1	Wheat	cytosol, nucleus, plastid	13.1	33.1
TraesCS2D01G001700.2	Wheat	cytosol, peroxisome, plasma membrane	9.82	32.61
TraesCS7D01G503700.2	Wheat	cytosol	13.84	32.46
TraesCS5D01G005500.1	Wheat	cytosol	14.31	31.42
TraesCS7D01G526700.1	Wheat	cytosol	12.63	30.27
TraesCS2D01G025400.2	Wheat	cytosol	13.47	29.69
TraesCS2D01G572000.2	Wheat	cytosol	13.56	28.71
TraesCS5D01G539100.3	Wheat	cytosol, nucleus, plasma membrane	21.42	28.52
TraesCS2D01G598800.1	Wheat	cytosol	13.19	28.26
TraesCS3D01G153100.1	Wheat	cytosol, mitochondrion, plastid, vacuole	12.07	26.6
TraesCS2D01G068800.1	Wheat	cytosol, plastid	17.87	24.18
TraesCS2D01G579800.2	Wheat	cytosol	17.31	23.63
TraesCS2D01G026700.1	Wheat	cytosol	13.75	22.55
TraesCS2D01G580000.1	Wheat	cytosol	18.9	22.52
TraesCS5D01G017400.1	Wheat	cytosol	13.56	22.21
TraesCS3D01G439500.2	Wheat	plastid	17.31	22.16
TraesCS1D01G271500.1	Wheat	cytosol	13.1	21.88
TraesCS5D01G003500.1	Wheat	mitochondrion	11.04	21.77
TraesCS7D01G011800.2	Wheat	cytosol	14.13	19.92
TraesCS1D01G031300.1	Wheat	cytosol	14.13	17.48
TraesCS7D01G012400.1	Wheat	mitochondrion	14.78	17.14
TraesCS3D01G095000.1	Wheat	plasma membrane	12.63	16.54
TraesCS7D01G000800.1	Wheat	cytosol	14.31	15.85
TraesCS7D01G527000.1	Wheat	cytosol	15.15	12.2

Protein Annotations

Gene3D:1.10.510.10	MapMan:15.5.12	MapMan:18.4.1.46	Gene3D:3.30.200.20	InterPro:CBP60	InterPro:CIGR2
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515
GO:GO:0005516	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR005202	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF03514	PFAM:PF07887	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF31	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	InterPro:TF_GRAS	EnsemblPlantsGene:TraesCS5D01G422300
EnsemblPlants:TraesCS5D01G422300.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:482292097..482299978

Molecular Weight (calculated)

119758.0 Da

IEP (calculated)

6.512

GRAVY (calculated)

-0.397

Length

1069 amino acids

Sequence
(BLAST)

0001: MDDAGSESTA VPLDLLLQIT DGFSEERKLG SGSFGEVYLG VHPDGQKIAV KKIYDMPGVD EEQFQNEFKN LARLQHRNIV RLVGYCHHIQ EVPAMYEGKL
0101: VLAEKIHRAL CLEYMSNGSL EKYISDECDK YDWHTGYGII KGICQGLKYL HTKLEPPIYH LDLKPANILL DENMVPRIAD FGISRLFGDE RTRATKSTLG
0201: TQGYLPPEYI RNYLISSKFD IFSLGVVIIK IMAGRAGYYK SAEMSSHEFI NVVQENWTNR PHETSSLMKA YSKQVKICIE IGLSCVQEDR HKRPTVQNIV
0301: DRLNETETEC TCAYKKFEVQ ENSGGLTPNY FMNNGRSVSE VPLNNDAGPS IQARNAWQYP KDMTAQQELG ERQAASLPNG IYEPPRQIME GFPESGGTTT
0401: VERQDLAVRV QEAITDPFVV KDRRSALNGK SYPPSKEEAV HRMENVSLKG KRCNDLADKN ITTVKRFMGH YHRDKSGLQK LKVKSWKLPA FKKFEERENS
0501: GVLIPDYLMM NGCPVRAVSL NNDAGPSVQA RTIWQYPNDM AAQHVFSDRH PLNGFSRAAV LSNNGAGPSN QGTLPFSQPT YEQTVHQGNG QHDPSMAQNG
0601: IPDYLPQGNI LNDQGSLSAQ PTPFHNFLPV PADEMITGAS LTDEQTEYFS TTDSLGTLEN AIPGPELDIS CDSPKSLLQA KNPLKQGNWR QLLGINTGDL
0701: KQVIIACGKA AAENDIHTEV LISELRQLVS ISGDPMQRLG AYMLEGLVAR FSSSGSKLYK SLKYKEPTSS ELMSYMHLLY EMCPFYMFGY MSANGAIAEA
0801: IKGENFVHII DFQIAQGSQW ITIIQALAAR SGGPPCLRIT GIDDSNSAYA RGGGLDMVGT RLHSVSASCG VPFEFNAVHA ASHEVYLEHL DIRPGEVIVV
0901: NFAYQLHHTP DESVSTENHR DRIIRMIKSL APRVVTLVEQ ESNTNTTPFF QRYLETLDYY TAIFEIIDVA LPRDDKTRIS TEQHCLARDI ISLIACEGAE
1001: RVERHEVFGK WKARFAMAGF RPYPLSSLVN NTIKTLLDGY HRCYRLEERD GVLYLGWKSR MLVVSSAWR

Best Arabidopsis Sequence Match ( AT1G50600.3 )
(BLAST)

001: MEATQKHMIQ EGSSMFYHQP SSVKQMDLSV QTFDSYCTLE SSSGTKSHPC LNNKNNSSST TSFSSNESPI SQANNNNLSR FNNHSPEENN NSPLSGSSAT
101: NTNETELSLM LKDLETAMME PDVDNSYNNQ GGFGQQHGVV SSAMYRSMEM ISRGDLKGVL YECAKAVENY DLEMTDWLIS QLQQMVSVSG EPVQRLGAYM
201: LEGLVARLAS SGSSIYKALR CKDPTGPELL TYMHILYEAC PYFKFGYESA NGAIAEAVKN ESFVHIIDFQ ISQGGQWVSL IRALGARPGG PPNVRITGID
301: DPRSSFARQG GLELVGQRLG KLAEMCGVPF EFHGAALCCT EVEIEKLGVR NGEALAVNFP LVLHHMPDES VTVENHRDRL LRLVKHLSPN VVTLVEQEAN
401: TNTAPFLPRF VETMNHYLAV FESIDVKLAR DHKERINVEQ HCLAREVVNL IACEGVEREE RHEPLGKWRS RFHMAGFKPY PLSSYVNATI KGLLESYSEK
501: YTLEERDGAL YLGWKNQPLI TSCAWR

Arabidopsis Description

SCL5scarecrow-like 5 [Source:TAIR;Acc:AT1G50600]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.