Factsheet for TraesCS5D01G539100.3

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

plasma membrane 1
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
MultiLoc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G025000.1	Wheat	cytosol	20.42	63.08
TraesCS5D01G502300.1	Wheat	cytosol	19.8	60.0
TraesCS2D01G019800.1	Wheat	cytosol	16.31	58.22
TraesCS1D01G077800.1	Wheat	cytosol	12.83	55.68
TraesCS3D01G030400.1	Wheat	cytosol	13.32	53.77
TraesCS2D01G026500.1	Wheat	cytosol	20.55	48.53
TraesCS7D01G361600.1	Wheat	cytosol	18.93	45.78
TraesCS4D01G089600.1	Wheat	cytosol	18.06	45.17
TraesCS4D01G089100.1	Wheat	cytosol	17.81	45.11
TraesCS4D01G089200.2	Wheat	cytosol	17.81	44.0
TraesCS2D01G203200.1	Wheat	cytosol	17.19	42.86
TraesCS2D01G024700.1	Wheat	cytosol	26.4	42.66
HORVU1Hr1G007930.6	Barley	nucleus	26.53	42.09
TraesCS5D01G299800.1	Wheat	cytosol	18.06	41.55
TraesCS7D01G487900.1	Wheat	cytosol	25.16	40.64
TraesCS7D01G526800.1	Wheat	cytosol	17.81	40.17
TraesCS7D01G005800.2	Wheat	cytosol	17.43	39.77
TraesCS7D01G005900.1	Wheat	cytosol	8.97	39.13
TraesCS2D01G025500.1	Wheat	mitochondrion	18.06	38.46
TraesCS7D01G525000.1	Wheat	nucleus	17.19	38.23
TraesCS2D01G019600.2	Wheat	cytosol	29.76	37.94
TraesCS7D01G526200.1	Wheat	cytosol	16.69	37.53
TraesCS7D01G503700.2	Wheat	cytosol	20.55	36.18
TraesCS7D01G526700.1	Wheat	cytosol	19.8	35.65
TraesCS2D01G001700.2	Wheat	cytosol, peroxisome, plasma membrane	14.2	35.4
TraesCS5D01G422600.1	Wheat	cytosol	21.92	34.92
TraesCS2D01G024900.1	Wheat	cytosol	19.68	34.73
TraesCS2D01G057700.1	Wheat	cytosol	19.18	33.92
TraesCS7D01G000700.1	Wheat	cytosol	19.43	33.62
TraesCS5D01G543500.1	Wheat	cytosol, nucleus, plastid	17.31	32.86
TraesCS2D01G025400.2	Wheat	cytosol	19.8	32.78
TraesCS7D01G486900.4	Wheat	cytosol	28.77	32.54
TraesCS7D01G527100.1	Wheat	cytosol	12.45	32.36
TraesCS1A01G030900.3	Wheat	cytosol	29.02	31.32
TraesCS5D01G005500.1	Wheat	cytosol	18.8	31.01
TraesCS2D01G572000.2	Wheat	cytosol	19.3	30.69
TraesCS2D01G598800.1	Wheat	cytosol	18.31	29.46
TraesCS3D01G153100.1	Wheat	cytosol, mitochondrion, plastid, vacuole	17.68	29.28
TraesCS2D01G068800.1	Wheat	cytosol, plastid	25.65	26.08
TraesCS3D01G439500.2	Wheat	plastid	26.65	25.63
TraesCS1D01G271500.1	Wheat	cytosol	19.3	24.22
TraesCS2D01G579800.2	Wheat	cytosol	22.66	23.24
TraesCS5D01G017400.1	Wheat	cytosol	18.56	22.82
TraesCS5D01G003500.1	Wheat	mitochondrion	15.07	22.32
TraesCS2D01G026700.1	Wheat	cytosol	18.06	22.24
TraesCS5D01G422300.1	Wheat	cytosol, nucleus, plasma membrane	28.52	21.42
TraesCS2D01G580000.1	Wheat	cytosol	23.79	21.29
TraesCS7D01G011800.2	Wheat	cytosol	19.3	20.45
TraesCS1D01G031300.1	Wheat	cytosol	21.54	20.02
TraesCS3D01G095000.1	Wheat	plasma membrane	18.31	18.01
TraesCS7D01G012400.1	Wheat	mitochondrion	20.17	17.57
TraesCS7D01G000800.1	Wheat	cytosol	20.17	16.79
TraesCS7D01G527000.1	Wheat	cytosol	25.03	15.14

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.46	Gene3D:2.130.10.10	Gene3D:2.60.40.10	Gene3D:3.30.200.20	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001680	InterPro:IPR013783	InterPro:IPR015943
InterPro:IPR017986	InterPro:Ig-like_fold	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF00400	ScanProsite:PS00107
ScanProsite:PS00108	ScanProsite:PS00678	PFscan:PS50011	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR27002
PANTHER:PTHR27002:SF365	InterPro:PapD-like_sf	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00320
SUPFAM:SSF49354	SUPFAM:SSF50978	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS5D01G539100	EnsemblPlants:TraesCS5D01G539100.3
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	TIGR:cd00200

Description

No Description!

Coordinates

chr5D:+:550922620..550952663

Molecular Weight (calculated)

90729.6 Da

IEP (calculated)

5.661

GRAVY (calculated)

-0.210

Length

803 amino acids

Sequence
(BLAST)

001: MDLVSVEPRD LSFHLLEEIT DGFSEERKLG SGGFGKVYMG VLKDGEKIAV KLLHPLPGLE DSDQQFQNEF DNLVKLRHQN IVHLVGYCYE IQKRYVDYNG
101: RNIFAEDIRR VLCFEYMQKG SLDKYLSDEC SGHGWNTRYA IIRGICKGLK YLHEELESPI YHLDLKPANV LLDEDMTPKI ADFGLSRFFF GEEQTQVTKT
201: SMGTLGYLPP EYIERGVISN KFDIFSLGVV IIKIMTGPKG YSRSAEMLSH QFSELVNKNW RSRFHSTSLN MVQSYLEQVK TCIEIALSCV EADRQKRPDI
301: GYIVNKLDET EMLIQLQHAL SIDAGSSLNQ ISPDMPTGSG LLDASPKIES GCLHASPNIE GGLLDIHPCQ LDFLFEPNKL ISCPLRLTNN LGDQHVAFRC
401: VPKTPEIYLD GLSQFQGVLP PRSTCTYVLT MEMQQHPPTN MDALSLVLES CVVPEDIGDI DDYMSRQGPG HAVRLMAICG PAGKTVTSEP IRPRIKIIYC
501: RDEFRETLSM DVHPTEPWIL GGHCNGYVSI WNYETQERVI SMRATKESGR LHDSHWILSI KFIPRRQWFV TGGGNGYIQV FTCMTMDELT AFKAHSSWVE
601: SLAIHPSQPF VLSASADCLI KLWDWENDWT CVRTFSEHSD NVQQVMFNPW ETNTFGSVSK DCTAKVWSIT SGDSLATLSS KSQQVCVDFF PPSGNCQYMI
701: TGSVDGTARI WNLEAKKCVR QLKGLQHTVC GCTVGVVHFL PDHPTLVTVS ADYAVSFRDP TTYRYERTFD FKLDMVRGGF AYLERIRSLV IGFDDGFAIM
801: EIN

Best Arabidopsis Sequence Match ( AT3G15980.1 )
(BLAST)

001: MPLRLDIKRK FAQRSERVKS VDLHPTEPWI LASLYSGTVC IWNYQTQTIT KSFEVTELPV RSAKFIPRKQ WVVAGADDMY IRVYNYNTMD KVKVFEAHSD
101: YIRCVAVHPT LPYVLSSSDD MLIKLWDWEN GWACTQIFEG HSHYVMQVVF NPKDTNTFAS ASLDRTIKIW NLGSPDPNFT LDAHQKGVNC VDYFTGGDKP
201: YLITGSDDHT AKVWDYQTKS CVQTLDGHTH NVSAVCFHPE LPIIITGSED GTVRIWHATT YRLENTLNYG LERVWAIGYI KSSRRVVIGY DEGTIMVKLG
301: REIPVASMDS SGKIIWAKHN EIQTANIKSI GAGYEATDGE RLPLSVKELG TCDLYPQSLK HNPNGRFVVV CGDGEYIIYT ALAWRNRSFG SGLEFVWSSE
401: GECAVRESSS KIKIFSKNFQ ERKSIRPTFS AEKIFGGTLL AMCSNDFICF YDWAECRLIQ QIDVTVKNLY WAESGDLVAI ASDTSFYILK YNRELVSSHF
501: DSGRPTDEEG VEDAFEVLHE NDERVRTGIW VGDCFIYNNS SWKLNYCVGG EVTTMYHLDR PMYLLGYIAN QSRVYLVDKE FNVIGYTLLL SLIEYKTLVM
601: RGDLDRANQI LPTIPKEQHN NVAHFLESRG MIEDALEIAT DPDYKFDLAI QLGRLEIAKE IAEEVQSESK WKQLGELAMS SGKLQLAEDC MKYAMDLSGL
701: LLLYSSLGDA EGVSKLACLA KEQGKNNVAF LCLFTLGRLE DCLQLLVESN RIPEAALMAR SYLPSKVSEI VALWREDLSK VNPKAAESLA DPEEYSNLFE
801: DWQVALSVEA NTAETRGVYT AAENYPSHAD KPSITLVEAF RNLQVEAEES LENGNIDHEV AEENGHVENE GDEEEQQEEE VNEEEGVVDA DSTDGAVLVN
901: GSEVLTPHP

Arabidopsis Description

Coatomer subunit beta' [Source:UniProtKB/TrEMBL;Acc:F4J1E5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.