Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 plastid: 16595579
plastid: 18071923
plastid: 18419817
plastid: 19643044
plastid: 23683508
golgi: 25769308
unclear: 25769308
mitochondrion: 26136264
nucleus: 26228564
plastid: 28542341
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
msms PMID: 19643044 doi
DY Hou, H Xu, GY Du, JT Lin, M Duan, AG Guo
College of Life Science, Northwest A&F University, Yangling, Shaanxi 712100, P. R. China.
msms PMID: 26228564 doi
E Bancel, T Bonnot, M Davanture, G Branlard, M Zivy, P Martre
Blaise Pascal University, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Avenue des Landais, F-63 170 Aubière, France., CNRS, PAPPSO, UMR 0320/8120 Génétique Quantitative et Évolution - Le Moulon, F-91190 Gif-sur-Yvette, France., INRA, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, 5 chemin de Beaulieu, F-63 039 Clermont-Ferrand, France.
msms PMID: 18419817 doi
FM Dupont
Western Regional Research Center, United States Department of Agriculture, Agricultural Research Service, 800 Buchanan Street, Albany, CA 94710K, USA.
msms PMID: 28542341 doi
K Shi, J Gu, H Guo, L Zhao, Y Xie, H Xiong, J Li, S Zhao, X Song, L Liu
National Key Facility for Crop Gene Resources and Genetic Improvement, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China., School of Life Sciences, Qingdao Agricultural University, Qingdao, Shandong, China.
msms PMID: 18071923 doi
LA Blomqvist, M Ryberg, C Sundqvist
Department of Plant and Environmental Sciences, Göteborg University, P.O. Box 461, 405 30 Göteborg, Sweden.
msms PMID: 26136264 doi
S Wang, G Zhang, Y Zhang, Q Song, Z Chen, J Wang, J Guo, N Niu, J Wang, S Ma
College of Agronomy, Northwest A&F University, National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Yangling, Shaanxi 712100, P. R. China zhanggaisheng18@sohu.com., College of Agronomy, Northwest A&F University, National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Yangling, Shaanxi 712100, P. R. China., Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, P. R. China.
msms PMID: 16595579 doi
Y Balmer, WH Vensel, FM DuPont, BB Buchanan, WJ Hurkman
Department of Plant and Microbial Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.
msms PMID: 23683508 doi
ZH He, HW Li, Y Shen, ZS Li, H Mi
National Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai 200032, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G186100.1 Wheat plastid 88.66 97.46
HORVU5Hr1G064700.7 Barley cytosol 98.32 96.89
Os10t0356000-00 Rice plastid 95.8 95.6
TraesCS3A01G215800.1 Wheat cytosol 21.01 94.34
TraesCS1D01G170000.1 Wheat cytosol 33.19 94.05
TraesCS1D01G169900.1 Wheat mitochondrion, plastid 36.55 92.55
TraesCS3A01G215900.1 Wheat cytosol 30.04 91.67
TraesCS5D01G010200.1 Wheat plastid 86.97 91.19
Protein Annotations
KEGG:00630+4.1.1.39KEGG:00710+4.1.1.39MapMan:1.2.1.1.1Gene3D:3.20.20.110Gene3D:3.30.70.150GO:GO:0000287
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0015977
GO:GO:0016984InterPro:IPR036376InterPro:IPR036422HAMAP:MF_01338PFAM:PF00016PFAM:PF02788
ScanProsite:PS00157PANTHER:PTHR42704PANTHER:PTHR42704:SF2InterPro:RuBisCOInterPro:RuBisCO_lsuIInterPro:RuBisCO_lsu_C
InterPro:RuBisCO_lsu_C_sfInterPro:RuBisCO_lsu_N_sfInterPro:RuBisCO_lsu_fd_NInterPro:RuBisCo_large_chain_ASSUPFAM:SSF51649SUPFAM:SSF54966
EnsemblPlantsGene:TraesCS5D01G425100EnsemblPlants:TraesCS5D01G425100.1TIGR:cd08212SEG:seg::
Description
No Description!
Coordinates
chr5D:-:483801282..483802712
Molecular Weight (calculated)
52692.9 Da
IEP (calculated)
6.711
GRAVY (calculated)
-0.259
Length
476 amino acids
Sequence
(BLAST)
001: MSPQTETKAG VGFQAGVKDY KLTYYTPEYE TKDTDILAAF RVSPQPGVPP EEAGAAVAAE SSTGTWTTVW TDGLTSLDRY KGRCYHIEPV AGEDNQWICY
101: VAYPLDLFEE GSVTNMFTSI VGNVFGFKAL CTLRLEDLRI PPTYSKKFQG PPHGIQVERD KLNKYGRPLL GCTIKPKLGL SAKNYGRACY ECLHGGLDFT
201: KDDENVNSQP FMRWRDRFVF CAKAIYKSQA ETGEIKGHYL NATAGTCEEM IKRAVFAREL GVPIVMHDYL TGGFTANTTL AHYCRANGLL LHIHRAMHAV
301: IDRQKNHGMH FRVLAKALRM SGGDHIHSGT VVGKLEGERE MTLGFVDLLR DDFIEKDRAR GIFFTQDWVS MPGVIPVASG GIHVWHMPAL TEIFGDDSVL
401: QFGGGTLGHP WGNAPGAAAN RVALEACVQA RNEGRDLARE GNEIIRAACK WSPELAAACE VWKAIKFEFE PVDTID
Best Arabidopsis Sequence Match ( ATCG00490.1 )
(BLAST)
001: MSPQTETKAS VGFKAGVKEY KLTYYTPEYE TKDTDILAAF RVTPQPGVPP EEAGAAVAAE SSTGTWTTVW TDGLTSLDRY KGRCYHIEPV PGEETQFIAY
101: VAYPLDLFEE GSVTNMFTSI VGNVFGFKAL AALRLEDLRI PPAYTKTFQG PPHGIQVERD KLNKYGRPLL GCTIKPKLGL SAKNYGRAVY ECLRGGLDFT
201: KDDENVNSQP FMRWRDRFLF CAEAIYKSQA ETGEIKGHYL NATAGTCEEM IKRAVFAREL GVPIVMHDYL TGGFTANTSL SHYCRDNGLL LHIHRAMHAV
301: IDRQKNHGMH FRVLAKALRL SGGDHIHAGT VVGKLEGDRE STLGFVDLLR DDYVEKDRSR GIFFTQDWVS LPGVLPVASG GIHVWHMPAL TEIFGDDSVL
401: QFGGGTLGHP WGNAPGAVAN RVALEACVQA RNEGRDLAVE GNEIIREACK WSPELAAACE VWKEITFNFP TIDKLDGQE
Arabidopsis Description
RBCLRibulose bisphosphate carboxylase large chain [Source:UniProtKB/Swiss-Prot;Acc:O03042]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.