Factsheet for HORVU5Hr1G064700.7

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G030760.1	Barley	cytosol, mitochondrion	7.87	100.0
HORVU0Hr1G029790.1	Barley	cytosol	99.79	99.79
HORVU0Hr1G031270.1	Barley	cytosol	99.79	99.79
HORVU6Hr1G049260.1	Barley	cytosol	99.79	99.79
HORVU7Hr1G091620.1	Barley	cytosol	99.79	99.79
AGP50763	Barley	cytosol	98.34	99.16
TraesCS3B01G186100.1	Wheat	plastid	88.61	98.85
TraesCS5D01G425100.1	Wheat	plastid	96.89	98.32
HORVU0Hr1G026090.1	Barley	cytosol	21.12	98.08
HORVU0Hr1G027620.1	Barley	cytosol	39.13	97.42
HORVU6Hr1G047870.6	Barley	cytosol	96.27	96.27
Os10t0356000-00	Rice	plastid	94.82	96.02
HORVU0Hr1G036870.1	Barley	cytosol, mitochondrion	14.49	94.59
TraesCS3A01G215800.1	Wheat	cytosol	20.7	94.34
HORVU0Hr1G033030.1	Barley	cytosol	16.98	94.25
HORVU7Hr1G065780.1	Barley	cytosol	15.11	93.59
TraesCS3A01G215900.1	Wheat	cytosol	29.81	92.31
HORVU0Hr1G034320.1	Barley	cytosol	16.56	88.89
HORVU2Hr1G084620.1	Barley	cytosol, mitochondrion, plastid	12.84	82.67
HORVU3Hr1G048820.1	Barley	cytosol	15.11	82.02
HORVU0Hr1G024560.2	Barley	plastid	19.46	65.28
HORVU3Hr1G055820.2	Barley	cytosol, plastid	9.32	62.5
HORVU2Hr1G084630.3	Barley	mitochondrion	20.08	57.4

Protein Annotations

KEGG:00630+4.1.1.39	KEGG:00710+4.1.1.39	MapMan:1.2.1.1.1	Gene3D:3.20.20.110	Gene3D:3.30.70.150	UniProt:A0A287RJK1
ncoils:Coil	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0015977	GO:GO:0016984	EnsemblPlantsGene:HORVU5Hr1G064700	EnsemblPlants:HORVU5Hr1G064700.7	InterPro:IPR036376
InterPro:IPR036422	HAMAP:MF_01338	PFAM:PF00016	PFAM:PF02788	ScanProsite:PS00157	PANTHER:PTHR42704
PANTHER:PTHR42704:SF2	InterPro:RuBisCO	InterPro:RuBisCO_lsuI	InterPro:RuBisCO_lsu_C	InterPro:RuBisCO_lsu_C_sf	InterPro:RuBisCO_lsu_N_sf
InterPro:RuBisCO_lsu_fd_N	InterPro:RuBisCo_large_chain_AS	SUPFAM:SSF51649	SUPFAM:SSF54966	UniParc:UPI000B4707F6	SEG:seg

Description

No Description!

Coordinates

chrchr5H:-:498648644..498650092

Molecular Weight (calculated)

53547.8 Da

IEP (calculated)

6.669

GRAVY (calculated)

-0.275

Length

483 amino acids

Sequence
(BLAST)

001: KSCREGLMSP QTETKAGVGF QAGVKDYKLT YYTPEYETKD TDILAAFRVS PQPGVPPEEA GAAVAAESST GTWTTVWTDG LTSLDRYKGR CYHIEPVAGE
101: DSQWICYVAY PLDLFEEGSV TNMFTSIVGN VFGFKALRAL RLEDLRIPPT YSKTFQGPPH GIQVERDKLN KYGRPLLGCT IKPKLGLSAK NYGRACYECL
201: RGGLDFTKDD ENVNSQPFMR WRDRFVFCAE AIYKSQAETG EIKGHYLNAT AGTCEEMIKR AVFARELGVP IVMHDYLTGG FTANTTLAHY CRDNGLLLHI
301: HRAMHAVIDR QKNHGMHFRV LAKALRMSGG DHIHSGTVVG KLEGEREMTL GFVYLLRDDF IEKDRARGIF FTQDWVSMPG VIPVASGGIH VWHMPALTEI
401: FGDDSVLQFG GGTLGHPWGN APGAAANRVA LEACVQARNE GRDLAREGNE IIRAACKWSP ELAAACEVWK AIKFEFEPVD TID

Best Arabidopsis Sequence Match ( AT2G07732.1 )
(BLAST)

001: MNNAAKRADC WFGAKNYGRA VYECLRGGLY FTKDDENVNS QPFMRWRDRF LFCAEAVYKA QAETGGIKGH YLNATPGTCE EMIKRAVFAR ELGVPIVMHD
101: YLTGGFTANT SLAHSR

Arabidopsis Description

Ribulose bisphosphate carboxylase large chain, catalytic domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4INE2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.