Factsheet for HORVU6Hr1G047870.6

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G030760.1	Barley	cytosol, mitochondrion	7.87	100.0
HORVU0Hr1G029790.1	Barley	cytosol	96.48	96.48
HORVU0Hr1G031270.1	Barley	cytosol	96.48	96.48
HORVU7Hr1G091620.1	Barley	cytosol	96.48	96.48
HORVU6Hr1G049260.1	Barley	cytosol	96.48	96.48
HORVU5Hr1G064700.7	Barley	cytosol	96.27	96.27
AGP50763	Barley	cytosol	95.03	95.82
HORVU0Hr1G026090.1	Barley	cytosol	20.29	94.23
HORVU0Hr1G027620.1	Barley	cytosol	37.06	92.27
HORVU0Hr1G036870.1	Barley	cytosol, mitochondrion	14.08	91.89
HORVU0Hr1G033030.1	Barley	cytosol	16.36	90.8
VIT_07s0031g03000.t01	Wine grape	cytosol	11.39	90.16
TraesCS5D01G010200.1	Wheat	plastid	83.23	88.55
HORVU7Hr1G065780.1	Barley	cytosol	14.29	88.46
HORVU0Hr1G034320.1	Barley	cytosol	15.73	84.44
HORVU2Hr1G084620.1	Barley	cytosol, mitochondrion, plastid	12.22	78.67
HORVU3Hr1G048820.1	Barley	cytosol	14.49	78.65
HORVU0Hr1G024560.2	Barley	plastid	19.67	65.97
HORVU3Hr1G055820.2	Barley	cytosol, plastid	9.32	62.5
HORVU2Hr1G084630.3	Barley	mitochondrion	19.46	55.62

Protein Annotations

KEGG:00630+4.1.1.39	KEGG:00710+4.1.1.39	MapMan:1.2.1.1.1	Gene3D:3.20.20.110	Gene3D:3.30.70.150	UniProt:A0A287U3I1
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0015977	GO:GO:0016984	EnsemblPlantsGene:HORVU6Hr1G047870	EnsemblPlants:HORVU6Hr1G047870.6	InterPro:IPR036376	InterPro:IPR036422
HAMAP:MF_01338	PFAM:PF00016	PFAM:PF02788	ScanProsite:PS00157	PANTHER:PTHR42704	PANTHER:PTHR42704:SF2
InterPro:RuBisCO	InterPro:RuBisCO_lsuI	InterPro:RuBisCO_lsu_C	InterPro:RuBisCO_lsu_C_sf	InterPro:RuBisCO_lsu_N_sf	InterPro:RuBisCO_lsu_fd_N
InterPro:RuBisCo_large_chain_AS	SUPFAM:SSF51649	SUPFAM:SSF54966	UniParc:UPI000B4775DF	SEG:seg	:

Description

No Description!

Coordinates

chrchr6H:-:287695351..287696799

Molecular Weight (calculated)

53660.8 Da

IEP (calculated)

6.238

GRAVY (calculated)

-0.299

Length

483 amino acids

Sequence
(BLAST)

001: KSCREGLMSP QTETKAGVGF QAGVKDYKLT YYTPEYETKD TDILAAFQVS PQPGVPPEEA GAAVAAESST GTWTTSWTDG LTSLDRYKGR CYHIEPIVGE
101: DSQWICYVAN PLDLFEEGSV TNMFSSIVGN VFGFKALRAL RLVDLRIPPT YSKTFQGPPH GIQVERDKLN KYDRPLLGCT IKPKLGLSAK NYGRACYECL
201: RGGLDFTKDD ENVNSQPFMR WRDRFVFCAE AIYKSQAETG EIKGHYLNAT AGTCEEMIKR AVFARELGVP IVMHDYLTGG FTANTTLAHY CRDNGLLLHI
301: HRAMHAVIDR QKNHGMHFRG LAKELRLSGG DHIHSGTVVG KLEREREMTL GFVDLLRDDF IEKDHARGIF FTQDWVSMPG VIPVASGGIH VWYMPALTEI
401: FGDDFVLQFG GGTLGHPWGN APGAAANRVD LEACVQARNE GRDVAREGNE IIRAACKWSP ELAAACEVWK AIKFEFEPVD TID

Best Arabidopsis Sequence Match ( AT2G07732.1 )
(BLAST)

001: MNNAAKRADC WFGAKNYGRA VYECLRGGLY FTKDDENVNS QPFMRWRDRF LFCAEAVYKA QAETGGIKGH YLNATPGTCE EMIKRAVFAR ELGVPIVMHD
101: YLTGGFTANT SLAHSR

Arabidopsis Description

Ribulose bisphosphate carboxylase large chain, catalytic domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4INE2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.