Factsheet for HORVU0Hr1G026090.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G065780.1	Barley	cytosol	71.15	94.87
Zm00001d045698_P001	Maize	cytosol	74.04	72.64
HORVU0Hr1G034320.1	Barley	cytosol	59.62	68.89
HORVU0Hr1G033030.1	Barley	cytosol	53.85	64.37
HORVU3Hr1G048820.1	Barley	cytosol	52.88	61.8
HORVU0Hr1G036870.1	Barley	cytosol, mitochondrion	41.35	58.11
HORVU0Hr1G027620.1	Barley	cytosol	99.04	53.09
Bra041116.1-P	Field mustard	cytosol, mitochondrion	100.0	21.62
AGP50763	Barley	cytosol	99.04	21.5
HORVU0Hr1G031270.1	Barley	cytosol	99.04	21.33
HORVU0Hr1G029790.1	Barley	cytosol	99.04	21.33
HORVU6Hr1G049260.1	Barley	cytosol	99.04	21.33
HORVU7Hr1G091620.1	Barley	cytosol	99.04	21.33
HORVU5Hr1G064700.7	Barley	cytosol	98.08	21.12
HORVU6Hr1G047870.6	Barley	cytosol	94.23	20.29
HORVU0Hr1G024560.2	Barley	plastid	7.69	5.56
HORVU2Hr1G084630.3	Barley	mitochondrion	4.81	2.96
HORVU0Hr1G030760.1	Barley	cytosol, mitochondrion	0.0	0.0
HORVU2Hr1G084620.1	Barley	cytosol, mitochondrion, plastid	0.0	0.0
HORVU3Hr1G055820.2	Barley	cytosol, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU0Hr1G026090.1	EnsemblPlantsGene:HORVU0Hr1G026090	Gene3D:3.20.20.110	GO:GO:0000287	GO:GO:0003674	GO:GO:0005488
InterPro:IPR036376	InterPro:RuBisCO_lsu_C	InterPro:RuBisCO_lsu_C_sf	KEGG:00630+4.1.1.39	KEGG:00710+4.1.1.39	PANTHER:PTHR42704
PANTHER:PTHR42704:SF2	PFAM:PF00016	SUPFAM:SSF51649	UniParc:UPI000B48217B	UniProt:A0A287E959	MapMan:35.1

Description

No Description!

Coordinates

chrchrUn:+:137434094..137434496

Molecular Weight (calculated)

11244.3 Da

IEP (calculated)

4.774

GRAVY (calculated)

-0.050

Length

104 amino acids

Sequence
(BLAST)

001: FVDLLRDDFI EKDRARGIFF TQDWVSMPGV IPVASGGIHV WHMPALTEIF GDDSVLQFGG GTLGHPWGNA PGAAANRVAL EACVQARNEG RDLAREGNEI
101: IRAA

Best Arabidopsis Sequence Match ( ATCG00490.1 )
(BLAST)

001: MSPQTETKAS VGFKAGVKEY KLTYYTPEYE TKDTDILAAF RVTPQPGVPP EEAGAAVAAE SSTGTWTTVW TDGLTSLDRY KGRCYHIEPV PGEETQFIAY
101: VAYPLDLFEE GSVTNMFTSI VGNVFGFKAL AALRLEDLRI PPAYTKTFQG PPHGIQVERD KLNKYGRPLL GCTIKPKLGL SAKNYGRAVY ECLRGGLDFT
201: KDDENVNSQP FMRWRDRFLF CAEAIYKSQA ETGEIKGHYL NATAGTCEEM IKRAVFAREL GVPIVMHDYL TGGFTANTSL SHYCRDNGLL LHIHRAMHAV
301: IDRQKNHGMH FRVLAKALRL SGGDHIHAGT VVGKLEGDRE STLGFVDLLR DDYVEKDRSR GIFFTQDWVS LPGVLPVASG GIHVWHMPAL TEIFGDDSVL
401: QFGGGTLGHP WGNAPGAVAN RVALEACVQA RNEGRDLAVE GNEIIREACK WSPELAAACE VWKEITFNFP TIDKLDGQE

Arabidopsis Description

RBCLRibulose bisphosphate carboxylase large chain [Source:UniProtKB/Swiss-Prot;Acc:O03042]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.