Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G029790.1 | Barley | cytosol | 100.0 | 100.0 |
| HORVU0Hr1G030760.1 | Barley | cytosol, mitochondrion | 7.87 | 100.0 |
| HORVU0Hr1G031270.1 | Barley | cytosol | 100.0 | 100.0 |
| HORVU6Hr1G049260.1 | Barley | cytosol | 100.0 | 100.0 |
| HORVU5Hr1G064700.7 | Barley | cytosol | 99.79 | 99.79 |
| AGP50763 | Barley | cytosol | 98.55 | 99.37 |
| HORVU0Hr1G026090.1 | Barley | cytosol | 21.33 | 99.04 |
| HORVU0Hr1G027620.1 | Barley | cytosol | 38.92 | 96.91 |
| HORVU6Hr1G047870.6 | Barley | cytosol | 96.48 | 96.48 |
| HORVU0Hr1G036870.1 | Barley | cytosol, mitochondrion | 14.49 | 94.59 |
| HORVU0Hr1G033030.1 | Barley | cytosol | 16.98 | 94.25 |
| HORVU7Hr1G065780.1 | Barley | cytosol | 15.11 | 93.59 |
| Bra041116.1-P | Field mustard | cytosol, mitochondrion | 88.61 | 88.98 |
| HORVU0Hr1G034320.1 | Barley | cytosol | 16.56 | 88.89 |
| HORVU2Hr1G084620.1 | Barley | cytosol, mitochondrion, plastid | 12.84 | 82.67 |
| HORVU3Hr1G048820.1 | Barley | cytosol | 15.11 | 82.02 |
| HORVU0Hr1G024560.2 | Barley | plastid | 19.46 | 65.28 |
| HORVU3Hr1G055820.2 | Barley | cytosol, plastid | 9.32 | 62.5 |
| HORVU2Hr1G084630.3 | Barley | mitochondrion | 20.08 | 57.4 |
Protein Annotations
| KEGG:00630+4.1.1.39 | KEGG:00710+4.1.1.39 | MapMan:1.2.1.1.1 | Gene3D:3.20.20.110 | Gene3D:3.30.70.150 | UniProt:A0A287XBD1 |
| GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009536 | GO:GO:0015977 |
| GO:GO:0016984 | EnsemblPlantsGene:HORVU7Hr1G091620 | EnsemblPlants:HORVU7Hr1G091620.1 | InterPro:IPR036376 | InterPro:IPR036422 | HAMAP:MF_01338 |
| PFAM:PF00016 | PFAM:PF02788 | ScanProsite:PS00157 | PANTHER:PTHR42704 | PANTHER:PTHR42704:SF2 | InterPro:RuBisCO |
| InterPro:RuBisCO_lsuI | InterPro:RuBisCO_lsu_C | InterPro:RuBisCO_lsu_C_sf | InterPro:RuBisCO_lsu_N_sf | InterPro:RuBisCO_lsu_fd_N | InterPro:RuBisCo_large_chain_AS |
| SUPFAM:SSF51649 | SUPFAM:SSF54966 | UniParc:UPI000B4816FA | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr7H:+:560247229..560248677
Molecular Weight (calculated)
53499.7 Da
IEP (calculated)
6.561
GRAVY (calculated)
-0.280
Length
483 amino acids
Sequence
(BLAST)
(BLAST)
001: KSCREGLMSP QTETKAGVGF QAGVKDYKLT YYTPEYETKD TDILAAFRVS PQPGVPPEEA GAAVAAESST GTWTTVWTDG LTSLDRYKGR CYHIEPVAGE
101: DSQWICYVAY PLDLFEEGSV TNMFTSIVGN VFGFKALRAL RLEDLRIPPT YSKTFQGPPH GIQVERDKLN KYGRPLLGCT IKPKLGLSAK NYGRACYECL
201: RGGLDFTKDD ENVNSQPFMR WRDRFVFCAE AIYKSQAETG EIKGHYLNAT AGTCEEMIKR AVFARELGVP IVMHDYLTGG FTANTTLAHY CRDNGLLLHI
301: HRAMHAVIDR QKNHGMHFRV LAKALRMSGG DHIHSGTVVG KLEGEREMTL GFVDLLRDDF IEKDRARGIF FTQDWVSMPG VIPVASGGIH VWHMPALTEI
401: FGDDSVLQFG GGTLGHPWGN APGAAANRVA LEACVQARNE GRDLAREGNE IIRAACKWSP ELAAACEVWK AIKFEFEPVD TID
101: DSQWICYVAY PLDLFEEGSV TNMFTSIVGN VFGFKALRAL RLEDLRIPPT YSKTFQGPPH GIQVERDKLN KYGRPLLGCT IKPKLGLSAK NYGRACYECL
201: RGGLDFTKDD ENVNSQPFMR WRDRFVFCAE AIYKSQAETG EIKGHYLNAT AGTCEEMIKR AVFARELGVP IVMHDYLTGG FTANTTLAHY CRDNGLLLHI
301: HRAMHAVIDR QKNHGMHFRV LAKALRMSGG DHIHSGTVVG KLEGEREMTL GFVDLLRDDF IEKDRARGIF FTQDWVSMPG VIPVASGGIH VWHMPALTEI
401: FGDDSVLQFG GGTLGHPWGN APGAAANRVA LEACVQARNE GRDLAREGNE IIRAACKWSP ELAAACEVWK AIKFEFEPVD TID
001: MSPQTETKAS VGFKAGVKEY KLTYYTPEYE TKDTDILAAF RVTPQPGVPP EEAGAAVAAE SSTGTWTTVW TDGLTSLDRY KGRCYHIEPV PGEETQFIAY
101: VAYPLDLFEE GSVTNMFTSI VGNVFGFKAL AALRLEDLRI PPAYTKTFQG PPHGIQVERD KLNKYGRPLL GCTIKPKLGL SAKNYGRAVY ECLRGGLDFT
201: KDDENVNSQP FMRWRDRFLF CAEAIYKSQA ETGEIKGHYL NATAGTCEEM IKRAVFAREL GVPIVMHDYL TGGFTANTSL SHYCRDNGLL LHIHRAMHAV
301: IDRQKNHGMH FRVLAKALRL SGGDHIHAGT VVGKLEGDRE STLGFVDLLR DDYVEKDRSR GIFFTQDWVS LPGVLPVASG GIHVWHMPAL TEIFGDDSVL
401: QFGGGTLGHP WGNAPGAVAN RVALEACVQA RNEGRDLAVE GNEIIREACK WSPELAAACE VWKEITFNFP TIDKLDGQE
101: VAYPLDLFEE GSVTNMFTSI VGNVFGFKAL AALRLEDLRI PPAYTKTFQG PPHGIQVERD KLNKYGRPLL GCTIKPKLGL SAKNYGRAVY ECLRGGLDFT
201: KDDENVNSQP FMRWRDRFLF CAEAIYKSQA ETGEIKGHYL NATAGTCEEM IKRAVFAREL GVPIVMHDYL TGGFTANTSL SHYCRDNGLL LHIHRAMHAV
301: IDRQKNHGMH FRVLAKALRL SGGDHIHAGT VVGKLEGDRE STLGFVDLLR DDYVEKDRSR GIFFTQDWVS LPGVLPVASG GIHVWHMPAL TEIFGDDSVL
401: QFGGGTLGHP WGNAPGAVAN RVALEACVQA RNEGRDLAVE GNEIIREACK WSPELAAACE VWKEITFNFP TIDKLDGQE
Arabidopsis Description
RBCLRibulose bisphosphate carboxylase large chain [Source:UniProtKB/Swiss-Prot;Acc:O03042]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.