Factsheet for HORVU0Hr1G030760.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
WoLF PSORT:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0427800-00	Rice	cytosol, mitochondrion, plastid	94.74	24.32
Solyc04g039840.1.1	Tomato	cytosol	36.84	21.88
AGP50763	Barley	cytosol	100.0	7.93
HORVU0Hr1G029790.1	Barley	cytosol	100.0	7.87
HORVU0Hr1G031270.1	Barley	cytosol	100.0	7.87
HORVU7Hr1G091620.1	Barley	cytosol	100.0	7.87
HORVU6Hr1G049260.1	Barley	cytosol	100.0	7.87
HORVU6Hr1G047870.6	Barley	cytosol	100.0	7.87
HORVU5Hr1G064700.7	Barley	cytosol	100.0	7.87
HORVU3Hr1G048820.1	Barley	cytosol	0.0	0.0
Solyc10g047430.1.1	Tomato	cytosol	0.0	0.0
KRH24770	Soybean	extracellular, plastid	0.0	0.0
HORVU7Hr1G065780.1	Barley	cytosol	0.0	0.0
HORVU3Hr1G055820.2	Barley	cytosol, plastid	0.0	0.0
HORVU2Hr1G084630.3	Barley	mitochondrion	0.0	0.0
HORVU2Hr1G084620.1	Barley	cytosol, mitochondrion, plastid	0.0	0.0
HORVU0Hr1G036870.1	Barley	cytosol, mitochondrion	0.0	0.0
HORVU0Hr1G034320.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G033030.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G027620.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G026090.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G024560.2	Barley	plastid	0.0	0.0

Protein Annotations

KEGG:00630+4.1.1.39	KEGG:00710+4.1.1.39	MapMan:35.1	UniProt:A0A287EA78	GO:GO:0003674	GO:GO:0003735
GO:GO:0003824	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015977	GO:GO:0016984	GO:GO:0019538	EnsemblPlantsGene:HORVU0Hr1G030760	EnsemblPlants:HORVU0Hr1G030760.1	InterPro:IPR036422
PANTHER:PTHR23321	PANTHER:PTHR23321:SF35	InterPro:Ribosomal_S15_bac-type	InterPro:RuBisCO_lsu_N_sf	SUPFAM:SSF54966	UniParc:UPI000B475F4D

Description

No Description!

Coordinates

chrchrUn:-:178832184..178832335

Molecular Weight (calculated)

4260.9 Da

IEP (calculated)

4.355

GRAVY (calculated)

-0.726

Length

38 amino acids

Sequence
(BLAST)

1: MSPQTETKAG VGFQAGVKDY KLTYYTPEYE TKDTDILA

Best Arabidopsis Sequence Match ( ATCG00490.1 )
(BLAST)

001: MSPQTETKAS VGFKAGVKEY KLTYYTPEYE TKDTDILAAF RVTPQPGVPP EEAGAAVAAE SSTGTWTTVW TDGLTSLDRY KGRCYHIEPV PGEETQFIAY
101: VAYPLDLFEE GSVTNMFTSI VGNVFGFKAL AALRLEDLRI PPAYTKTFQG PPHGIQVERD KLNKYGRPLL GCTIKPKLGL SAKNYGRAVY ECLRGGLDFT
201: KDDENVNSQP FMRWRDRFLF CAEAIYKSQA ETGEIKGHYL NATAGTCEEM IKRAVFAREL GVPIVMHDYL TGGFTANTSL SHYCRDNGLL LHIHRAMHAV
301: IDRQKNHGMH FRVLAKALRL SGGDHIHAGT VVGKLEGDRE STLGFVDLLR DDYVEKDRSR GIFFTQDWVS LPGVLPVASG GIHVWHMPAL TEIFGDDSVL
401: QFGGGTLGHP WGNAPGAVAN RVALEACVQA RNEGRDLAVE GNEIIREACK WSPELAAACE VWKEITFNFP TIDKLDGQE

Arabidopsis Description

RBCLRibulose bisphosphate carboxylase large chain [Source:UniProtKB/Swiss-Prot;Acc:O03042]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.