Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 3
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g062420.1.1 | Tomato | cytosol | 24.66 | 15.79 |
| Solyc07g021190.1.1 | Tomato | cytosol | 13.7 | 8.77 |
| OQU80110 | Sorghum | extracellular, vacuole | 9.59 | 7.95 |
| Solyc01g007330.2.1 | Tomato | plastid | 45.21 | 6.92 |
| OQU83888 | Sorghum | cytosol | 17.81 | 6.02 |
| GSMUA_AchrUn_... | Banana | plastid | 4.11 | 3.09 |
| VIT_12s0055g00520.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 0.0 | 0.0 |
| CDY10606 | Canola | cytosol | 0.0 | 0.0 |
| Solyc12g062560.1.1 | Tomato | plastid | 0.0 | 0.0 |
| Solyc12g062550.1.1 | Tomato | plastid | 0.0 | 0.0 |
| Solyc12g062540.1.1 | Tomato | cytosol | 0.0 | 0.0 |
| Solyc07g021200.1.1 | Tomato | plastid | 0.0 | 0.0 |
| Solyc04g039840.1.1 | Tomato | cytosol | 0.0 | 0.0 |
| Solyc02g077860.1.1 | Tomato | cytosol, extracellular | 0.0 | 0.0 |
| Os05t0427800-00 | Rice | cytosol, mitochondrion, plastid | 0.0 | 0.0 |
| KRH24770 | Soybean | extracellular, plastid | 0.0 | 0.0 |
| HORVU2Hr1G084620.1 | Barley | cytosol, mitochondrion, plastid | 0.0 | 0.0 |
| HORVU0Hr1G030760.1 | Barley | cytosol, mitochondrion | 0.0 | 0.0 |
Protein Annotations
| KEGG:00630+4.1.1.39 | KEGG:00710+4.1.1.39 | Gene3D:3.20.20.110 | MapMan:35.1 | GO:GO:0000287 | GO:GO:0000312 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005840 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009536 | GO:GO:0009570 |
| GO:GO:0015977 | GO:GO:0016984 | InterPro:IPR036376 | UniProt:K4D005 | PFAM:PF00016 | ScanProsite:PS00157 |
| PANTHER:PTHR42704 | PANTHER:PTHR42704:SF2 | InterPro:RuBisCO_lsu_C | InterPro:RuBisCO_lsu_C_sf | InterPro:RuBisCo_large_chain_AS | SUPFAM:SSF51649 |
| EnsemblPlantsGene:Solyc10g047430.1 | EnsemblPlants:Solyc10g047430.1.1 | UniParc:UPI0002769D5A | SEG:seg | : | : |
Description
No Description!
Coordinates
chr10:-:40801051..40801272
Molecular Weight (calculated)
8498.3 Da
IEP (calculated)
10.228
GRAVY (calculated)
-0.742
Length
73 amino acids
Sequence
(BLAST)
(BLAST)
1: MVVPCSDVLL NLNCGYLQKN FGRAVYECLR GGLDFTKDDE NVNSQPFMRW RKDKIEITNL KSNSKSKRLK SRK
001: MNNAAKRADC WFGAKNYGRA VYECLRGGLY FTKDDENVNS QPFMRWRDRF LFCAEAVYKA QAETGGIKGH YLNATPGTCE EMIKRAVFAR ELGVPIVMHD
101: YLTGGFTANT SLAHSR
101: YLTGGFTANT SLAHSR
Arabidopsis Description
Ribulose bisphosphate carboxylase large chain, catalytic domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4INE2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.