Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES00795 | Sorghum | cytosol | 46.51 | 41.96 |
| Os01t0899425-00 | Rice | cytosol | 24.81 | 30.19 |
| ATMG00280.1 | Thale cress | mitochondrion | 24.03 | 28.18 |
| Solyc12g062420.1.1 | Tomato | cytosol | 21.71 | 24.56 |
| Solyc12g062550.1.1 | Tomato | plastid | 19.38 | 24.51 |
| Solyc01g007330.2.1 | Tomato | plastid | 52.71 | 14.26 |
| Solyc12g062560.1.1 | Tomato | plastid | 3.88 | 4.46 |
| Solyc07g021200.1.1 | Tomato | plastid | 3.88 | 2.76 |
| Solyc07g021190.1.1 | Tomato | cytosol | 2.33 | 2.63 |
| Solyc12g062540.1.1 | Tomato | cytosol | 2.33 | 2.07 |
| HORVU2Hr1G084630.3 | Barley | mitochondrion | 2.33 | 1.78 |
| Zm00001d051485_P001 | Maize | plastid | 2.33 | 1.64 |
| Solyc04g039840.1.1 | Tomato | cytosol | 0.0 | 0.0 |
| Solyc10g047430.1.1 | Tomato | cytosol | 0.0 | 0.0 |
Protein Annotations
| KEGG:00630+4.1.1.39 | KEGG:00710+4.1.1.39 | Gene3D:3.20.20.110 | MapMan:35.1 | GO:GO:0000287 | GO:GO:0003674 |
| GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR036376 | UniProt:K4B911 | PFAM:PF00016 | PFAM:PF03947 |
| PANTHER:PTHR42704 | PANTHER:PTHR42704:SF2 | InterPro:Ribosomal_L2_C | InterPro:RuBisCO_lsu_C | InterPro:RuBisCO_lsu_C_sf | SUPFAM:SSF50104 |
| SUPFAM:SSF51649 | EnsemblPlantsGene:Solyc02g077860.1 | EnsemblPlants:Solyc02g077860.1.1 | InterPro:Translation_prot_SH3-like_sf | UniParc:UPI0002767EF8 | SEG:seg |
Description
No Description!
Coordinates
chr2:+:42702183..42702795
Molecular Weight (calculated)
14070.3 Da
IEP (calculated)
8.960
GRAVY (calculated)
0.028
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNSNLIILN SLIIAETCEI KGHYLNATAG TCEEMIKRVV FARELGVPII MHDYLKGGFT ANTTLAHYCR DNGLLRTAIH NIEITLGKDG QLARAANAVA
101: KLITKEEKSV KLKLPSGGGL FSKQCWLNG
101: KLITKEEKSV KLKLPSGGGL FSKQCWLNG
001: MNNAAKRADC WFGAKNYGRA VYECLRGGLY FTKDDENVNS QPFMRWRDRF LFCAEAVYKA QAETGGIKGH YLNATPGTCE EMIKRAVFAR ELGVPIVMHD
101: YLTGGFTANT SLAHSR
101: YLTGGFTANT SLAHSR
Arabidopsis Description
Ribulose bisphosphate carboxylase large chain, catalytic domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4INE2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.