Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G07732.1 | Thale cress | mitochondrion | 92.73 | 87.93 |
| EES00795 | Sorghum | cytosol | 46.36 | 35.66 |
| Solyc02g077860.1.1 | Tomato | cytosol, extracellular | 28.18 | 24.03 |
| ATCG00490.1 | Thale cress | cytosol | 73.64 | 16.91 |
| HORVU2Hr1G084630.3 | Barley | mitochondrion | 16.36 | 10.65 |
| Zm00001d051485_P001 | Maize | plastid | 1.82 | 1.09 |
Protein Annotations
| KEGG:00630+4.1.1.39 | KEGG:00710+4.1.1.39 | Gene3D:3.20.20.110 | EntrezGene:3371324 | MapMan:35.1 | EMBL:AC006225 |
| ArrayExpress:ATMG00280 | EnsemblPlantsGene:ATMG00280 | RefSeq:ATMG00280 | TAIR:ATMG00280 | RefSeq:ATMG00280-TAIR-G | EnsemblPlants:ATMG00280.1 |
| TAIR:ATMG00280.1 | ProteinID:CAA69770.1 | GO:GO:0000287 | GO:GO:0000312 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005840 |
| GO:GO:0009536 | GO:GO:0009570 | InterPro:IPR036376 | RefSeq:NP_085496.1 | Symbol:ORF110A | UniProt:P93292 |
| PFAM:PF00016 | PANTHER:PTHR42704 | PANTHER:PTHR42704:SF2 | InterPro:RuBisCO_lsu_C | InterPro:RuBisCO_lsu_C_sf | SUPFAM:SSF51649 |
| UniParc:UPI00000A3550 | : | : | : | : | : |
Description
ORF110APutative uncharacterized mitochondrial protein AtMg00280 [Source:UniProtKB/Swiss-Prot;Acc:P93292]
Coordinates
chrMt:-:77819..78151
Molecular Weight (calculated)
12665.2 Da
IEP (calculated)
9.176
GRAVY (calculated)
-0.485
Length
110 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNAAKRADC WFGAKNYGRA VYECLRGGLY FTKDDENVNS QPFMRWRDRF LFCAEAVYKA QAETGGIKGH YLNATAGTCE EMIKRAVFAR ELGVPIVMHD
101: YLNRGIHRKY
101: YLNRGIHRKY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.