Factsheet for Zm00001d051485_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	plastid

plastid: 22065420

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037514_P001	Maize	plastid	69.4	73.41
HORVU2Hr1G084630.3	Barley	mitochondrion	33.33	36.09
GRMZM5G815453_P01	Maize	cytosol	90.16	34.16
Zm00001d000279_P001	Maize	plastid	90.16	34.16
Zm00001d006402_P004	Maize	mitochondrion, plastid	75.41	21.97
Solyc02g077860.1.1	Tomato	cytosol, extracellular	1.64	2.33
Os01t0899425-00	Rice	cytosol	1.09	1.89
ATMG00280.1	Thale cress	mitochondrion	1.09	1.82
AT2G07732.1	Thale cress	mitochondrion	1.09	1.72
Solyc12g062420.1.1	Tomato	cytosol	0.55	0.88
EES00795	Sorghum	cytosol	0.0	0.0
HORVU0Hr1G033030.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G034320.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G036870.1	Barley	cytosol, mitochondrion	0.0	0.0
Zm00001d045698_P001	Maize	cytosol	0.0	0.0

Protein Annotations

KEGG:00630+4.1.1.39	KEGG:00710+4.1.1.39	Gene3D:3.20.20.110	Gene3D:3.30.70.150	MapMan:35.1	UniProt:A0A1D6Q759
ProteinID:AQK54322.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0015977	GO:GO:0016984	InterPro:IPR036376	InterPro:IPR036422	PFAM:PF02788
PANTHER:PTHR42704	PANTHER:PTHR42704:SF2	InterPro:RuBisCO_lsu_C_sf	InterPro:RuBisCO_lsu_N_sf	InterPro:RuBisCO_lsu_fd_N	SUPFAM:SSF51649
SUPFAM:SSF54966	UniParc:UPI000842EE5A	EnsemblPlantsGene:Zm00001d051485	EnsemblPlants:Zm00001d051485_P001	EnsemblPlants:Zm00001d051485_T001	SEG:seg

Description

Putative uncharacterized mitochondrial protein

Coordinates

chr4:-:160248452..160249003

Molecular Weight (calculated)

20367.2 Da

IEP (calculated)

8.727

GRAVY (calculated)

-0.430

Length

183 amino acids

Sequence
(BLAST)

001: MSPQTETKAS VGFKAGVKDY KLTYYTPEYE TKDTDILAAS IPSNSSARAP EEAGAAVAAE SSTGTWTTVW TDGLTSLDRY KGRCYHIEPV PGDPDQYICY
101: VAYPLDLFEE GSVTNMFTSI VGNVFGFKAL RALRLEDLRI PPTYSKTFQG PPHGIQVERD KLNKYGRPLL GCTIKRIIRK KLR

Best Arabidopsis Sequence Match ( ATCG00490.1 )
(BLAST)

001: MSPQTETKAS VGFKAGVKEY KLTYYTPEYE TKDTDILAAF RVTPQPGVPP EEAGAAVAAE SSTGTWTTVW TDGLTSLDRY KGRCYHIEPV PGEETQFIAY
101: VAYPLDLFEE GSVTNMFTSI VGNVFGFKAL AALRLEDLRI PPAYTKTFQG PPHGIQVERD KLNKYGRPLL GCTIKPKLGL SAKNYGRAVY ECLRGGLDFT
201: KDDENVNSQP FMRWRDRFLF CAEAIYKSQA ETGEIKGHYL NATAGTCEEM IKRAVFAREL GVPIVMHDYL TGGFTANTSL SHYCRDNGLL LHIHRAMHAV
301: IDRQKNHGMH FRVLAKALRL SGGDHIHAGT VVGKLEGDRE STLGFVDLLR DDYVEKDRSR GIFFTQDWVS LPGVLPVASG GIHVWHMPAL TEIFGDDSVL
401: QFGGGTLGHP WGNAPGAVAN RVALEACVQA RNEGRDLAVE GNEIIREACK WSPELAAACE VWKEITFNFP TIDKLDGQE

Arabidopsis Description

RBCLRibulose bisphosphate carboxylase large chain [Source:UniProtKB/Swiss-Prot;Acc:O03042]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.