Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d045698_P001 | Maize | cytosol | 16.88 | 100.0 |
| GRMZM5G815453_P01 | Maize | cytosol | 61.15 | 79.5 |
| Zm00001d000279_P001 | Maize | plastid | 61.15 | 79.5 |
| Zm00001d037514_P001 | Maize | plastid | 21.82 | 79.19 |
| Zm00001d051485_P001 | Maize | plastid | 21.97 | 75.41 |
| Bra041116.1-P | Field mustard | cytosol, mitochondrion | 50.8 | 66.32 |
Protein Annotations
| KEGG:00630+4.1.1.39 | KEGG:00710+4.1.1.39 | Gene3D:3.20.20.110 | Gene3D:3.30.70.150 | MapMan:35.1 | UniProt:A0A1D6EVW3 |
| GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0015977 | GO:GO:0016984 | InterPro:IPR036376 | InterPro:IPR036422 | ProteinID:ONM23707.1 | PFAM:PF00016 |
| PFAM:PF02788 | PFAM:PF03981 | PANTHER:PTHR42704 | PANTHER:PTHR42704:SF2 | InterPro:RuBisCO_lsu_C | InterPro:RuBisCO_lsu_C_sf |
| InterPro:RuBisCO_lsu_N_sf | InterPro:RuBisCO_lsu_fd_N | SUPFAM:SSF51649 | SUPFAM:SSF54966 | UniParc:UPI0008441658 | InterPro:Ubiq_cyt_c_chap/UPF0174 |
| EnsemblPlantsGene:Zm00001d006402 | EnsemblPlants:Zm00001d006402_P004 | EnsemblPlants:Zm00001d006402_T004 | SEG:seg | : | : |
Description
Ribulose bisphosphate carboxylase large chain
Coordinates
chr2:-:206605659..206617133
Molecular Weight (calculated)
69342.3 Da
IEP (calculated)
8.355
GRAVY (calculated)
-0.167
Length
628 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRWRAAAYS ISAAAASRNS AAEAGALSRA LAKAPSPPSL PLQTLTRNFA KSAAAATATS PGPGASSPPA GPRPEIRLKS MFLSKPCSLA LPPDSPHRAV
101: DPQYKGIKRF LLTLLLFYSK QSKSIRGANV VYDRITSQVD APTIYDVFQL EKTFKTTFSL LVLHMWLVLR RLKEEGKDGV KFGQYIYEMY NHDVELRVSK
201: AGVNLLLTKW MKELEKIFYG NIVKYDAAIS PEARQDDLVN VIWREGLMSP QTETKASVGF KAGVKDYKLT YYTPEYETKD TDILAAFRVT PQLGVPPEEA
301: GAAVAAESST GTWTTVWTDG LTSLDRYKGR CYHIEPVPGD PDQYICYVAY PLDLFEEGSV TNMFTSIVGN VFGFKALRAL RLEDLRIPPA YSKTFQGTCE
401: EMIKRAVFAR ELGVPIVMHD YLTGGFTANT TLSHYCRDNG LLLHIHRAMH AVIDRQKNHG MHFRVLAKAL RMSGGDHIHS GTVVGKLEGE REITLGFVDL
501: LRDDFIEKDR SRGIFFTQDW VSMPGVIPVA SGGIHVWHMP ALTEIFGDDS VLQFGGGTLG HPWGNAPGAA ANRVALEACV QARNEGRDLA REGNEIIKAA
601: CKWSAELAAA CEIWKEIKFD GFKAMDTI
101: DPQYKGIKRF LLTLLLFYSK QSKSIRGANV VYDRITSQVD APTIYDVFQL EKTFKTTFSL LVLHMWLVLR RLKEEGKDGV KFGQYIYEMY NHDVELRVSK
201: AGVNLLLTKW MKELEKIFYG NIVKYDAAIS PEARQDDLVN VIWREGLMSP QTETKASVGF KAGVKDYKLT YYTPEYETKD TDILAAFRVT PQLGVPPEEA
301: GAAVAAESST GTWTTVWTDG LTSLDRYKGR CYHIEPVPGD PDQYICYVAY PLDLFEEGSV TNMFTSIVGN VFGFKALRAL RLEDLRIPPA YSKTFQGTCE
401: EMIKRAVFAR ELGVPIVMHD YLTGGFTANT TLSHYCRDNG LLLHIHRAMH AVIDRQKNHG MHFRVLAKAL RMSGGDHIHS GTVVGKLEGE REITLGFVDL
501: LRDDFIEKDR SRGIFFTQDW VSMPGVIPVA SGGIHVWHMP ALTEIFGDDS VLQFGGGTLG HPWGNAPGAA ANRVALEACV QARNEGRDLA REGNEIIKAA
601: CKWSAELAAA CEIWKEIKFD GFKAMDTI
001: MSPQTETKAS VGFKAGVKEY KLTYYTPEYE TKDTDILAAF RVTPQPGVPP EEAGAAVAAE SSTGTWTTVW TDGLTSLDRY KGRCYHIEPV PGEETQFIAY
101: VAYPLDLFEE GSVTNMFTSI VGNVFGFKAL AALRLEDLRI PPAYTKTFQG PPHGIQVERD KLNKYGRPLL GCTIKPKLGL SAKNYGRAVY ECLRGGLDFT
201: KDDENVNSQP FMRWRDRFLF CAEAIYKSQA ETGEIKGHYL NATAGTCEEM IKRAVFAREL GVPIVMHDYL TGGFTANTSL SHYCRDNGLL LHIHRAMHAV
301: IDRQKNHGMH FRVLAKALRL SGGDHIHAGT VVGKLEGDRE STLGFVDLLR DDYVEKDRSR GIFFTQDWVS LPGVLPVASG GIHVWHMPAL TEIFGDDSVL
401: QFGGGTLGHP WGNAPGAVAN RVALEACVQA RNEGRDLAVE GNEIIREACK WSPELAAACE VWKEITFNFP TIDKLDGQE
101: VAYPLDLFEE GSVTNMFTSI VGNVFGFKAL AALRLEDLRI PPAYTKTFQG PPHGIQVERD KLNKYGRPLL GCTIKPKLGL SAKNYGRAVY ECLRGGLDFT
201: KDDENVNSQP FMRWRDRFLF CAEAIYKSQA ETGEIKGHYL NATAGTCEEM IKRAVFAREL GVPIVMHDYL TGGFTANTSL SHYCRDNGLL LHIHRAMHAV
301: IDRQKNHGMH FRVLAKALRL SGGDHIHAGT VVGKLEGDRE STLGFVDLLR DDYVEKDRSR GIFFTQDWVS LPGVLPVASG GIHVWHMPAL TEIFGDDSVL
401: QFGGGTLGHP WGNAPGAVAN RVALEACVQA RNEGRDLAVE GNEIIREACK WSPELAAACE VWKEITFNFP TIDKLDGQE
Arabidopsis Description
RBCLRibulose bisphosphate carboxylase large chain [Source:UniProtKB/Swiss-Prot;Acc:O03042]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.