Factsheet for GRMZM5G815453_P01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d000279_P001	Maize	plastid	100.0	100.0
Zm00001d045698_P001	Maize	cytosol	21.74	99.06
Zm00001d051485_P001	Maize	plastid	34.16	90.16
Bra041116.1-P	Field mustard	cytosol, mitochondrion	85.09	85.45
Zm00001d037514_P001	Maize	plastid	28.36	79.19
Zm00001d006402_P004	Maize	mitochondrion, plastid	79.5	61.15

Protein Annotations

KEGG:00630+4.1.1.39	KEGG:00710+4.1.1.39	MapMan:1.2.1.1.1	Gene3D:3.20.20.110	Gene3D:3.30.70.150	UniProt:A0A096TUU6
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009853	GO:GO:0009987	GO:GO:0015977
GO:GO:0015979	GO:GO:0016491	GO:GO:0016829	GO:GO:0016984	GO:GO:0019253	GO:GO:0046872
GO:GO:0055114	EnsemblPlantsGene:GRMZM5G815453	EnsemblPlants:GRMZM5G815453_P01	EnsemblPlants:GRMZM5G815453_T01	InterPro:IPR036376	InterPro:IPR036422
HAMAP:MF_01338	PFAM:PF00016	PFAM:PF02788	ScanProsite:PS00157	PANTHER:PTHR42704	PANTHER:PTHR42704:SF2
InterPro:RuBisCO	InterPro:RuBisCO_lsuI	InterPro:RuBisCO_lsu_C	InterPro:RuBisCO_lsu_C_sf	InterPro:RuBisCO_lsu_N_sf	InterPro:RuBisCO_lsu_fd_N
InterPro:RuBisCo_large_chain_AS	SUPFAM:SSF51649	SUPFAM:SSF54966	UniParc:UPI000220B6E5	SEG:seg	:

Description

Ribulose bisphosphate carboxylase large chain [Source:UniProtKB/TrEMBL;Acc:A0A096TUU6]

Coordinates

chrPt:+:56824..58323

Molecular Weight (calculated)

53480.9 Da

IEP (calculated)

6.782

GRAVY (calculated)

-0.257

Length

483 amino acids

Sequence
(BLAST)

001: MSCREGLMSP QTETKASVGF KAGVKDYKLT YYTPEYETKD TDILAAFRVT PQLGVPPEEA GAAVAAESST GTWTTVWTDG LTSLDRYKGR CYHIEPVPGD
101: PDQYICYVAY PLDLFEEGSV TNMFTSIVGN VFGFKALRAL RLEDLRIPPA YSKTFQGPPH GIQVERDKLN KYGRPLLGCT IKPKLGLSAK NYGRACYECL
201: RGGLDFTKDD ENVNSQPFMR WRDRFVFCAE AIYKAQAETG EIKGHYLNAT AGTCEEMIKR AVFARELGVP IVMHDYLTGG FTANTTLSHY CRDNGLLLHI
301: HRAMHAVIDR QKNHGMHFRV LAKALRMSGG DHIHSGTVVG KLEGEREITL GFVDLLRDDF IEKDRSRGIF FTQDWVSMPG VIPVASGGIH VWHMPALTEI
401: FGDDSVLQFG GGTLGHPWGN APGAAANRVA LEACVQARNE GRDLAREGNE IIKAACKWSA ELAAACEIWK EIKFDGFKAM DTI

Best Arabidopsis Sequence Match ( ATCG00490.1 )
(BLAST)

001: MSPQTETKAS VGFKAGVKEY KLTYYTPEYE TKDTDILAAF RVTPQPGVPP EEAGAAVAAE SSTGTWTTVW TDGLTSLDRY KGRCYHIEPV PGEETQFIAY
101: VAYPLDLFEE GSVTNMFTSI VGNVFGFKAL AALRLEDLRI PPAYTKTFQG PPHGIQVERD KLNKYGRPLL GCTIKPKLGL SAKNYGRAVY ECLRGGLDFT
201: KDDENVNSQP FMRWRDRFLF CAEAIYKSQA ETGEIKGHYL NATAGTCEEM IKRAVFAREL GVPIVMHDYL TGGFTANTSL SHYCRDNGLL LHIHRAMHAV
301: IDRQKNHGMH FRVLAKALRL SGGDHIHAGT VVGKLEGDRE STLGFVDLLR DDYVEKDRSR GIFFTQDWVS LPGVLPVASG GIHVWHMPAL TEIFGDDSVL
401: QFGGGTLGHP WGNAPGAVAN RVALEACVQA RNEGRDLAVE GNEIIREACK WSPELAAACE VWKEITFNFP TIDKLDGQE

Arabidopsis Description

RBCLRibulose bisphosphate carboxylase large chain [Source:UniProtKB/Swiss-Prot;Acc:O03042]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.